RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 KCNT1Q5JUK3 1230 aa3.75□□□□□ -1.81
SMC4-227ENST00000497984 FAM83BQ5T0W9 1011 aa3.75□□□□□ -1.81
SMC4-227ENST00000497984 JMJD6Q6NYC1 403 aaPredicted RBP3.75□□□□□ -1.81
SMC4-227ENST00000497984 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.75□□□□□ -1.815e-13■■■■■ 348.1
SMC4-227ENST00000497984 C17orf77Q96MU5 243 aa3.75□□□□□ -1.81
SMC4-227ENST00000497984 TWNKQ96RR1 684 aa3.75□□□□□ -1.81
SMC4-227ENST00000497984 HAUS8Q9BT25 410 aa3.75□□□□□ -1.81
SMC4-227ENST00000497984 PAGR1Q9BTK6 254 aa3.75□□□□□ -1.81
SMC4-227ENST00000497984 PCDHGB5Q9Y5G0 923 aa3.75□□□□□ -1.81
SMC4-227ENST00000497984 C17orf113A0A1B0GUU1 675 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 TK1P04183 234 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 PTPN2P17706 415 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 ADD2P35612 726 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 CHKAP35790 457 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 AARSP49588 968 aaKnown RBP eCLIP3.74□□□□□ -1.813e-49■■■■■ 252.4
SMC4-227ENST00000497984 HSD17B4P51659 736 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 NR1H2P55055 460 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 BIRC2Q13490 618 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 RUNX2Q13950 521 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 PRKG1Q13976 671 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 TIGD6Q17RP2 521 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 TUBB8Q3ZCM7 444 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 CCDC174Q6PII3 467 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 C17orf99Q6UX52 265 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 KRBA2Q6ZNG9 492 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 MOB3CQ70IA8 216 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 TBC1D26Q86UD7 250 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 WDR63Q8IWG1 891 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 C1orf87Q8N0U7 546 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 CPXM2Q8N436 756 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 KLHDC9Q8NEP7 349 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 SPPL3Q8TCT6 385 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 RAB40AQ8WXH6 277 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 ABTB1Q969K4 478 aaPredicted RBP3.74□□□□□ -1.81
SMC4-227ENST00000497984 ZNF524Q96C55 264 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 RPS6KC1Q96S38 1066 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 CNGB3Q9NQW8 809 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 HCFC1R1Q9NWW0 138 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 SMAD5-AS1Q9Y6J3 95 aa3.74□□□□□ -1.81
SMC4-227ENST00000497984 ARHGAP10A1A4S6 786 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 TUBBP07437 444 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 PAX1P15863 534 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 S1PR1P21453 382 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 TMPOP42166 694 aaKnown RBP3.73□□□□□ -1.81
SMC4-227ENST00000497984 CLDN2P57739 230 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 SEC61BP60468 96 aaKnown RBP3.73□□□□□ -1.81
SMC4-227ENST00000497984 ACTR2P61160 394 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 TUBB4BP68371 445 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 NEDD9Q14511 834 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 EDRF1Q3B7T1 1238 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 MMEL1Q495T6 779 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 STXBP5Q5T5C0 1151 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 ZC2HC1BQ5TFG8 222 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 ANKRD54Q6NXT1 300 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 LCTLQ6UWM7 567 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 KMT5CQ86Y97 462 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 MYCT1Q8N699 235 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 DUSP19Q8WTR2 217 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 RUBCNQ92622 972 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 CDCA5Q96FF9 252 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 KXD1Q9BQD3 176 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.73□□□□□ -1.817e-7■■□□□ 12.7
SMC4-227ENST00000497984 MOV10L1Q9BXT6 1211 aaKnown RBP3.73□□□□□ -1.81
SMC4-227ENST00000497984 DDX4Q9NQI0 724 aaKnown RBP3.73□□□□□ -1.81
SMC4-227ENST00000497984 SMYD2Q9NRG4 433 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 KIF17Q9P2E2 1029 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 DERAQ9Y315 318 aa3.73□□□□□ -1.81
SMC4-227ENST00000497984 PABPN1LA6NDY0 278 aaKnown RBP3.72□□□□□ -1.81
SMC4-227ENST00000497984 FAM90A7PA6NKC0 464 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 FAM90A22PA8MWA6 464 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 FAM90A12PA8MX19 464 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 FAM90A23PA8MXZ1 464 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 CEP104O60308 925 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 PATE4P0C8F1 98 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 CD58P19256 250 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 USP8P40818 1118 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 EFR3AQ14156 821 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 ADCK5Q3MIX3 580 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 ZNF876PQ49A33 203 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 ZNF852Q6ZMS4 543 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 MTSS1LQ765P7 747 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 AGBL3Q8NEM8 1001 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 CADM4Q8NFZ8 388 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 MAGEC3Q8TD91 643 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 CNOT9Q92600 299 aaKnown RBP3.72□□□□□ -1.81
SMC4-227ENST00000497984 ZNF583Q96ND8 569 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 SLC32A1Q9H598 525 aa3.72□□□□□ -1.81
SMC4-227ENST00000497984 ESRP2Q9H6T0 727 aaKnown RBP3.72□□□□□ -1.81
SMC4-227ENST00000497984 AKR1B15C9JRZ8 316 aaPredicted RBP3.71□□□□□ -1.82
SMC4-227ENST00000497984 PER2O15055 1255 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 IRAK2O43187 625 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 TCEA3O75764 348 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 MTA2O94776 668 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 LDHAP00338 332 aaKnown RBP3.71□□□□□ -1.82
SMC4-227ENST00000497984 PCNAP12004 261 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 NOVP48745 357 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 POSTNQ15063 836 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 CTF1Q16619 201 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 CTXN3Q4LDR2 81 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 C10orf62Q5T681 223 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms