RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 CNGA3Q16281 694 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 WSCD2Q2TBF2 565 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 SLC45A4Q5BKX6 768 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 ARMC12Q5T9G4 340 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 KYAT3Q6YP21 454 aaKnown RBP17.19■□□□□ 0.34
SNX17-209ENST00000494893 DBX2Q6ZNG2 339 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 TSPAN33Q86UF1 283 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 SPATA22Q8NHS9 363 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 COG1Q8WTW3 980 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 KLHDC7BQ96G42 594 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 TRIB3Q96RU7 358 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 RBM15Q96T37 977 aaKnown RBP eCLIP17.19■□□□□ 0.34
SNX17-209ENST00000494893 ELF4Q99607 663 aaPredicted RBP17.19■□□□□ 0.34
SNX17-209ENST00000494893 SLC25A51Q9H1U9 297 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 L2HGDHQ9H9P8 463 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 GLOD4Q9HC38 313 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 TM7SF3Q9NS93 570 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 R3HDM2Q9Y2K5 976 aaKnown RBP17.19■□□□□ 0.34
SNX17-209ENST00000494893 MRFAP1Q9Y605 127 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 TRPM6Q9BX84 2022 aa17.19■□□□□ 0.34
SNX17-209ENST00000494893 CACNA1AO00555 2505 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 KNL1Q8NG31 2342 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 A0A1B0GTQ1 180 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 CFAP69A5D8W1 941 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 A6NNZ2 444 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 HACD1B0YJ81 288 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 GIPC1O14908 333 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 NEBLO76041 1014 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 VIPR1P32241 457 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 HNF1BP35680 557 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 IL9RQ01113 521 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 IRF4Q15306 451 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 Q6ZSR6 202 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 ZNF567Q8N184 647 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 PELI3Q8N2H9 469 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 PAF1Q8N7H5 531 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 HTR3CQ8WXA8 447 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 SCRN2Q96FV2 425 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 COQ10AQ96MF6 247 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 CAMK1GQ96NX5 476 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 GDF3Q9NR23 364 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 ASCC3Q8N3C0 2202 aaKnown RBP17.18■□□□□ 0.34
SNX17-209ENST00000494893 LRRK1Q38SD2 2015 aa17.18■□□□□ 0.34
SNX17-209ENST00000494893 A0A0J9YYE9 177 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 H7C0C1 242 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 ZNF185O15231 689 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 SH3BP5O60239 455 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 RECQL5O94762 991 aaPredicted RBP17.17■□□□□ 0.34
SNX17-209ENST00000494893 HEXIM1O94992 359 aaKnown RBP17.17■□□□□ 0.34
SNX17-209ENST00000494893 TJP3O95049 919 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 MT-CYBP00156 380 aaPredicted RBP17.17■□□□□ 0.34
SNX17-209ENST00000494893 TRBC1P01850 177 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 NFKB1P19838 968 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 ATP5OP48047 213 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 EIF3EP60228 445 aaKnown RBP17.17■□□□□ 0.34
SNX17-209ENST00000494893 SLC14A1Q13336 389 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 WHAMMP3Q1A5X7 153 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 CCDC181Q5TID7 509 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 KANSL1Q7Z3B3 1105 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 HSD11B1LQ7Z5J1 315 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 PTAR1Q7Z6K3 402 aaPredicted RBP17.17■□□□□ 0.34
SNX17-209ENST00000494893 CREG2Q8IUH2 290 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 PLA2G15Q8NCC3 412 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 DEFB124Q8NES8 71 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 SKA1Q96BD8 255 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 GORASP1Q9BQQ3 440 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 ERVMER34-1Q9H9K5 563 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 PCDH9Q9HC56 1237 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 RNF14Q9UBS8 474 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 PNMA8BQ9ULN7 279 aaPredicted RBP17.17■□□□□ 0.34
SNX17-209ENST00000494893 BTBD3Q9Y2F9 522 aa17.17■□□□□ 0.34
SNX17-209ENST00000494893 TP53BP1Q12888 1972 aaPredicted RBP17.17■□□□□ 0.34
SNX17-209ENST00000494893 GOLGA8CPA6NN73 597 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 FPGTO14772 594 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 CEP104O60308 925 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 KCNK5O95279 499 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 ELFN1P0C7U0 828 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 RBP3P10745 1247 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 RXRGP48443 463 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 CCT8P50990 548 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 BNIP3Q12983 259 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 FZD2Q14332 565 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 CDKN3Q16667 212 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 QPCTQ16769 361 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 CRTC1Q6UUV9 634 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 KDELC1Q6UW63 502 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 RFLNAQ6ZTI6 216 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 DGLUCYQ7Z3D6 616 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 RASGEF1CQ8N431 466 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 LPCAT1Q8NF37 534 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 FUBP1Q96AE4 644 aaKnown RBP17.16■□□□□ 0.34
SNX17-209ENST00000494893 OXNAD1Q96HP4 312 aaPredicted RBP17.16■□□□□ 0.34
SNX17-209ENST00000494893 USP29Q9HBJ7 922 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 HAUS2Q9NVX0 235 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 PCDHGB2Q9Y5G2 931 aa17.16■□□□□ 0.34
SNX17-209ENST00000494893 CAPN8A6NHC0 703 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 F5H423 210 aaPredicted RBP17.15■□□□□ 0.34
SNX17-209ENST00000494893 MTSS1O43312 755 aa17.15■□□□□ 0.34
SNX17-209ENST00000494893 LZTS3O60299 673 aaPredicted RBP17.15■□□□□ 0.34
SNX17-209ENST00000494893 PCDHGA12O60330 932 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms