RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 FBXO16Q8IX29 292 aaPredicted RBP15.41■□□□□ 0.06
SDF4-207ENST00000494748 TERB1Q8NA31 727 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 TRUB1Q8WWH5 349 aaKnown RBP15.41■□□□□ 0.06
SDF4-207ENST00000494748 SLC9A7Q96T83 725 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 TRIM8Q9BZR9 551 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 TBC1D13Q9NVG8 400 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 SLC30A1Q9Y6M5 507 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 OTOFQ9HC10 1997 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 CLDN5O00501 218 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 ARPC2O15144 300 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 CLOCKO15516 846 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 JCHAINP01591 159 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 PGK2P07205 417 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 GFAPP14136 432 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 CHRM3P20309 590 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 GNL1P36915 607 aaPredicted RBP15.41■□□□□ 0.06
SDF4-207ENST00000494748 CBX2Q14781 532 aaPredicted RBP15.41■□□□□ 0.06
SDF4-207ENST00000494748 TBPL2Q6SJ96 375 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 USP33Q8TEY7 942 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 PCDHA9Q9Y5H5 950 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 PLXNB2O15031 1838 aa15.41■□□□□ 0.06
SDF4-207ENST00000494748 PIRO00625 290 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 ZNF189O75820 626 aaPredicted RBP15.4■□□□□ 0.06
SDF4-207ENST00000494748 SNAP29O95721 258 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 MT-CYBP00156 380 aaPredicted RBP15.4■□□□□ 0.06
SDF4-207ENST00000494748 JUNBP17275 347 aaPredicted RBP15.4■□□□□ 0.06
SDF4-207ENST00000494748 FASP25445 335 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 HOXA11P31270 313 aaPredicted RBP15.4■□□□□ 0.06
SDF4-207ENST00000494748 TPI1P60174 286 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 ATP1A4Q13733 1029 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 PDPRQ8NCN5 879 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 PAPD5Q8NDF8 572 aaKnown RBP15.4■□□□□ 0.06
SDF4-207ENST00000494748 TRPV3Q8NET8 790 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 SH3RF2Q8TEC5 729 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 ANKRD49Q8WVL7 239 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 KLRG1Q96E93 195 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 VAT1Q99536 393 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 BRD8Q9H0E9 1235 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 CHST12Q9NRB3 414 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 GIMAP2Q9UG22 337 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 NEU3Q9UQ49 428 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 AKT3Q9Y243 479 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 PTGDR2Q9Y5Y4 395 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 A0A0J9YYE9 177 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 BBIP1A8MTZ0 92 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 B4GAT1O43505 415 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 RFC2P35250 354 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 ADRA1AP35348 466 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 CAPRIN1Q14444 709 aaKnown RBP15.4■□□□□ 0.06
SDF4-207ENST00000494748 NEDD8Q15843 81 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 SLC14A2Q15849 920 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 ARHGAP36Q6ZRI8 547 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 OSTM1Q86WC4 334 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 ANKRD13AQ8IZ07 590 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 UBXN10Q96LJ8 280 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 DUSP16Q9BY84 665 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 PLEKHA5Q9HAU0 1116 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 IL1RL2Q9HB29 575 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 FBXW11Q9UKB1 542 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 B3GNT3Q9Y2A9 372 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 MTSS1O43312 755 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 CPB1P15086 417 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 TSPAN8P19075 237 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 APLP1P51693 650 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 RABGGTBP53611 331 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 POU4F1Q01851 419 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 TMTC4Q5T4D3 741 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 GTF2IRD2BQ6EKJ0 949 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 TMEM207Q6UWW9 146 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 GTF2IRD2Q86UP8 949 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 SIX6OS1Q8N1H7 587 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 PNPLA1Q8N8W4 532 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 HOPXQ9BPY8 73 aaPredicted RBP15.4■□□□□ 0.06
SDF4-207ENST00000494748 EIF2AQ9BY44 585 aaKnown RBP15.4■□□□□ 0.06
SDF4-207ENST00000494748 SPATC1LQ9H0A9 340 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 AKTIPQ9H8T0 292 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 EML4Q9HC35 981 aaKnown RBP15.4■□□□□ 0.06
SDF4-207ENST00000494748 PDGFCQ9NRA1 345 aa15.4■□□□□ 0.06
SDF4-207ENST00000494748 TRNAU1APQ9NX07 287 aaKnown RBP15.4■□□□□ 0.06
SDF4-207ENST00000494748 SMPD3Q9NY59 655 aaPredicted RBP15.4■□□□□ 0.06
SDF4-207ENST00000494748 DNAJB2P25686 324 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 TMBIM6P55061 237 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 GNA12Q03113 381 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 CYP2A13Q16696 494 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 VPS26BQ4G0F5 336 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 ZNF484Q5JVG2 852 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 GRAMD4Q6IC98 578 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.39■□□□□ 0.05
SDF4-207ENST00000494748 SNX19Q92543 992 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 ITPKCQ96DU7 683 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 C19orf60Q96EN9 201 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 ABHD8Q96I13 439 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 TSGA13Q96PP4 275 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 TBL1YQ9BQ87 522 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 IFT80Q9P2H3 777 aaPredicted RBP15.39■□□□□ 0.05
SDF4-207ENST00000494748 C9JVG2 144 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 CNMDO75829 334 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 APBA3O96018 575 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 CD151P48509 253 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 MAPK10P53779 464 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms