RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 PRNPP04156 253 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 DRD1P21728 446 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 ARSDP51689 593 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 SEPT6Q14141 434 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 PON2Q15165 354 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 CNGA3Q16281 694 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 ZNF805Q5CZA5 627 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 EMC10Q5UCC4 262 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 KCNMB4Q86W47 210 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 LRRC6Q86X45 466 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 STK40Q8N2I9 435 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 GRIN3AQ8TCU5 1115 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 PDCD6IPQ8WUM4 868 aaKnown RBP12.69□□□□□ -0.38
VPS52-220ENST00000493674 OR8D1Q8WZ84 308 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 EID2BQ96D98 161 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 SCRN2Q96FV2 425 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 SGSM3Q96HU1 749 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 ATP6V1G3Q96LB4 118 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 KLHL32Q96NJ5 620 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 GABRG3Q99928 467 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 MFSD1Q9H3U5 465 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 CD248Q9HCU0 757 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 PRSS16Q9NQE7 514 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 CACNA2D2Q9NY47 1150 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 PSMC3IPQ9P2W1 217 aaPredicted RBP12.69□□□□□ -0.38
VPS52-220ENST00000493674 CTNNAL1Q9UBT7 734 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 SUN2Q9UH99 717 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 PPM1HQ9ULR3 514 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 KCTD3Q9Y597 815 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 ARL5AQ9Y689 179 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 STON1Q9Y6Q2 735 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 ZFC3H1O60293 1989 aaKnown RBP12.69□□□□□ -0.38
VPS52-220ENST00000493674 NPIPB15A6NHN6 443 aaPredicted RBP12.68□□□□□ -0.38
VPS52-220ENST00000493674 UPK3BL1B0FP48 263 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 HMGB1P1B2RPK0 211 aaPredicted RBP12.68□□□□□ -0.38
VPS52-220ENST00000493674 UPK3BL2E5RIL1 263 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 POC1B-GALNT4F8VUJ3 575 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 H7C0S8 307 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 BNIP3LO60238 219 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 UGT1A9O60656 530 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 RPP40O75818 363 aaKnown RBP12.68□□□□□ -0.38
VPS52-220ENST00000493674 PIAS1O75925 651 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 FAM155BO75949 473 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 ALPIP09923 528 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 ERVK-10P10266 1014 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 CTPS1P17812 591 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 PAMP19021 973 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 LPOP22079 712 aaPredicted RBP12.68□□□□□ -0.38
VPS52-220ENST00000493674 ITGB7P26010 798 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 HNF1BP35680 557 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 HMGCLP35914 325 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 SLCO1A2P46721 670 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 EPHB1P54762 984 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 PDE1BQ01064 536 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 GPS2Q13227 327 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 CCINQ13939 588 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 PTPRRQ15256 657 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 ARSIQ5FYB1 569 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 TEDDM1Q5T9Z0 273 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 LYSMD3Q7Z3D4 306 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 GLT6D1Q7Z4J2 308 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 GALNT7Q86SF2 657 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 SLC26A11Q86WA9 606 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 CYP4X1Q8N118 509 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 ZNF687Q8N1G0 1237 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 ZNF513Q8N8E2 541 aaPredicted RBP12.68□□□□□ -0.38
VPS52-220ENST00000493674 OR13C4Q8NGS5 318 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 CDKL2Q92772 493 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 DNAJC1Q96KC8 554 aaKnown RBP12.68□□□□□ -0.38
VPS52-220ENST00000493674 NECAB3Q96P71 396 aaPredicted RBP12.68□□□□□ -0.38
VPS52-220ENST00000493674 UGT1A7Q9HAW7 530 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 UGT1A10Q9HAW8 530 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 UGT1A8Q9HAW9 530 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 POLR3BQ9NW08 1133 aaPredicted RBP12.68□□□□□ -0.38
VPS52-220ENST00000493674 IL1RAPL1Q9NZN1 696 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 IL17CQ9P0M4 197 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 SARDHQ9UL12 918 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 PSAT1Q9Y617 370 aa12.68□□□□□ -0.38
VPS52-220ENST00000493674 TP53BP1Q12888 1972 aaPredicted RBP12.67□□□□□ -0.38
VPS52-220ENST00000493674 ANKRD12Q6UB98 2062 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 CCDC78A2IDD5 438 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 GOLGA6L10A6NI86 522 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 C2orf81A6NN90 581 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 DLL1O00548 723 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 SPINT1O43278 529 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 ADAM23O75077 832 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 VAPBO95292 243 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 TIMP2P16035 220 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 LHCGRP22888 699 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 ABL2P42684 1182 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 MSH2P43246 934 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 POLR2LP62875 67 aaKnown RBP12.67□□□□□ -0.38
VPS52-220ENST00000493674 MRPS21P82921 87 aaKnown RBP12.67□□□□□ -0.38
VPS52-220ENST00000493674 UGP2Q16851 508 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 SKIDA1Q1XH10 827 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 C2orf27AQ580R0 203 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 HSP90AA5PQ58FG0 334 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 PACS1Q6VY07 963 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 TPRG1Q6ZUI0 275 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 USP45Q70EL2 814 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms