RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 CFAP157Q5JU67 520 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 RNFT1Q5M7Z0 435 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 LIN9Q5TKA1 542 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 PRAMEF20Q5VT98 475 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 CST9LP1Q5W188 147 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 LRFN4Q6PJG9 635 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 SASS6Q6UVJ0 657 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 CRELD2Q6UXH1 353 aaPredicted RBP5.58□□□□□ -1.52
SF1-217ENST00000486960 USP49Q70CQ1 688 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 VASH2Q86V25 355 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 VPS36Q86VN1 386 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 CXorf67Q86X51 503 aaPredicted RBP5.58□□□□□ -1.52
SF1-217ENST00000486960 GALNT4Q8N4A0 578 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 DTWD2Q8NBA8 298 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 C7orf57Q8NEG2 295 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 BBS1Q8NFJ9 593 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 SLC22A8Q8TCC7 542 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 ST7LQ8TDW4 575 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 WHAMMQ8TF30 809 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 BCL7CQ8WUZ0 217 aaPredicted RBP5.58□□□□□ -1.52
SF1-217ENST00000486960 ZCCHC14Q8WYQ9 949 aaKnown RBP5.58□□□□□ -1.52
SF1-217ENST00000486960 RFKQ969G6 155 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 ELMO3Q96BJ8 720 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 FAM149B1Q96BN6 582 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 MRPL38Q96DV4 380 aaKnown RBP5.58□□□□□ -1.52
SF1-217ENST00000486960 C14orf79Q96F83 325 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 PPP1R10Q96QC0 940 aaKnown RBP5.58□□□□□ -1.52
SF1-217ENST00000486960 CCT7Q99832 543 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 C17orf80Q9BSJ5 609 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 STRA6Q9BX79 667 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 POLR1EQ9GZS1 481 aaKnown RBP5.58□□□□□ -1.52
SF1-217ENST00000486960 MKRN2Q9H000 416 aaKnown RBP5.58□□□□□ -1.52
SF1-217ENST00000486960 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.58□□□□□ -1.52
SF1-217ENST00000486960 UPF2Q9HAU5 1272 aaKnown RBP5.58□□□□□ -1.52
SF1-217ENST00000486960 LY9Q9HBG7 655 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 MAGEE1Q9HCI5 957 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 GP6Q9HCN6 339 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 RBM12Q9NTZ6 932 aaKnown RBP5.58□□□□□ -1.52
SF1-217ENST00000486960 SMPD3Q9NY59 655 aaPredicted RBP5.58□□□□□ -1.52
SF1-217ENST00000486960 EHD2Q9NZN4 543 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 DNAJC16Q9Y2G8 782 aa5.58□□□□□ -1.52
SF1-217ENST00000486960 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.58□□□□□ -1.52
SF1-217ENST00000486960 CENPEQ02224 2701 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 PCNX1Q96RV3 2341 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 COL6A6A6NMZ7 2263 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 FRMD3A2A2Y4 597 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 LINC01553A4QN01 128 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 NPIPB15A6NHN6 443 aaPredicted RBP5.57□□□□□ -1.52
SF1-217ENST00000486960 FAM170BA6NMN3 283 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 SLC33A1O00400 549 aaPredicted RBP5.57□□□□□ -1.52
SF1-217ENST00000486960 NDUFAB1O14561 156 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 KLK10O43240 276 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 UBOX5O94941 541 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 PTBP3O95758 552 aaKnown RBP5.57□□□□□ -1.52
SF1-217ENST00000486960 AK1P00568 194 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 MT-ATP6P00846 226 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 GNAI2P04899 355 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 CLEC2LP0C7M8 214 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 SRCP12931 536 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 CPA1P15085 419 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 U2AF2P26368 475 aaKnown RBP eCLIP5.57□□□□□ -1.525e-6■■■□□ 18.3
SF1-217ENST00000486960 AXLP30530 894 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 WASP42768 502 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 MAGEA1P43355 309 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 RFX5P48382 616 aaPredicted RBP5.57□□□□□ -1.52
SF1-217ENST00000486960 NRIP1P48552 1158 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 CLCN5P51795 746 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 MRPL12P52815 198 aaKnown RBP5.57□□□□□ -1.52
SF1-217ENST00000486960 ACLYP53396 1101 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 METAP1P53582 386 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 NME5P56597 212 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 GSCP56915 257 aaPredicted RBP5.57□□□□□ -1.52
SF1-217ENST00000486960 RIPPLY3P57055 190 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 OTUD4Q01804 1114 aaKnown RBP5.57□□□□□ -1.52
SF1-217ENST00000486960 MGAT5Q09328 741 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 HYAL1Q12794 435 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 SCGB2A2Q13296 93 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 TUBB3Q13509 450 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 IL10RAQ13651 578 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 IRF3Q14653 427 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 CLCA4Q14CN2 919 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 KRT31Q15323 416 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 COL28A1Q2UY09 1125 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 ZBTB37Q5TC79 503 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 ATL3Q6DD88 541 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 KLHL35Q6PF15 583 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 SEZ6L2Q6UXD5 910 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 BEND4Q6ZU67 534 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 ADCK2Q7Z695 626 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 KIAA1328Q86T90 577 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 ZNF598Q86UK7 904 aaKnown RBP5.57□□□□□ -1.52
SF1-217ENST00000486960 ELMOD2Q8IZ81 293 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 SPARTQ8N0X7 666 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 KREMEN2Q8NCW0 462 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 C3orf20Q8ND61 904 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 SHCBP1Q8NEM2 672 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 AKR7LQ8NHP1 331 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 CDC26Q8NHZ8 85 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 TSPEARQ8WU66 669 aa5.57□□□□□ -1.52
SF1-217ENST00000486960 DNAJA4Q8WW22 397 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms