RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 STK36Q9NRP7 1315 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 A0A088AWK7 358 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 KANSL1LA0AUZ9 987 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 F8W810 466 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 PFKFB2O60825 505 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 USP1O94782 785 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 ABLIM3O94929 683 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 DCNP07585 359 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 MYBP10242 640 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 RPL17P18621 184 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 GLRA2P23416 452 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 AKAP5P24588 427 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 HOXA9P31269 272 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 MAGEA9P43362 315 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 GPC5P78333 572 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 CYP4A11Q02928 519 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 ELAVL2Q12926 359 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 STK3Q13188 491 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 CTBP1Q13363 440 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 CAPSQ13938 189 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 ZNF268Q14587 947 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 SPECC1Q5M775 1068 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 PPM1LQ5SGD2 360 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 NCAPH2Q6IBW4 605 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 PDXDC1Q6P996 788 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 PARM1Q6UWI2 310 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 MTSS1LQ765P7 747 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 GET4Q7L5D6 327 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 DGLUCYQ7Z3D6 616 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 KIAA2013Q8IYS2 634 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 SUMF1Q8NBK3 374 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 PJA1Q8NG27 643 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 LNX1Q8TBB1 728 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 ADAMTS18Q8TE60 1221 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 WIPF2Q8TF74 440 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 RUBCNQ92622 972 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 FGF14Q92915 247 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 RMDN1Q96DB5 314 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 CDK5RAP3Q96JB5 506 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 B3GALT6Q96L58 329 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 FAM118BQ9BPY3 351 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 EIF2AK1Q9BQI3 630 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 CLSTN3Q9BQT9 956 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 RPP25Q9BUL9 199 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 DDX23Q9BUQ8 820 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 APOL6Q9BWW8 343 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 FZD8Q9H461 694 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 NXF3Q9H4D5 531 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 TTC12Q9H892 705 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 SMURF2Q9HAU4 748 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 TCF7L1Q9HCS4 588 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 PDRG1Q9NUG6 133 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 PRMT7Q9NVM4 692 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 FBXW11Q9UKB1 542 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 FBXO4Q9UKT5 387 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 CDH7Q9ULB5 785 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 R4GN57 208 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 SDK1Q7Z5N4 2213 aa4.31□□□□□ -1.72
SNRNP40-205ENST00000486941 SPAG17Q6Q759 2223 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 TMEM189-UBE2V1I3L0A0 370 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 ACKR2O00590 384 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 NCAM2O15394 837 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 B4GALT5O43286 388 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 KINO60870 393 aaKnown RBP4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 PMPCBO75439 489 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 ALPLP05186 524 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 PRKCBP05771 671 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 THP07101 528 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 DLDP09622 509 aaKnown RBP4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 GLULP15104 373 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 GKP32189 559 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 KRT2P35908 639 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 WNT3P56703 355 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 RAB1AP62820 205 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 SRSF1Q07955 248 aaKnown RBP eCLIP4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 LMAN2Q12907 356 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 GTF2H3Q13889 308 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 NAB2Q15742 525 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 MLF2Q15773 248 aaPredicted RBP4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 PSMD5Q16401 504 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 CALCRLQ16602 461 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 PLA1AQ53H76 456 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 EARS2Q5JPH6 523 aaKnown RBP4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 LIN9Q5TKA1 542 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 FAM171A1Q5VUB5 890 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 PRSS55Q6UWB4 352 aaPredicted RBP4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 ZDHHC24Q6UX98 284 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 CDR2LQ86X02 465 aaPredicted RBP4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 CEP57Q86XR8 500 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 GRAMD1CQ8IYS0 662 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 MAML2Q8IZL2 1156 aaPredicted RBP4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 ZNF548Q8NEK5 533 aaPredicted RBP4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 MCPH1Q8NEM0 835 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 BPIFB1Q8TDL5 484 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 MAML1Q92585 1016 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 FGF13Q92913 245 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 CLDN23Q96B33 292 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 RSPRY1Q96DX4 576 aa4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 CCDC43Q96MW1 224 aaKnown RBP4.3□□□□□ -1.72
SNRNP40-205ENST00000486941 MOGAT1Q96PD6 335 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms