RNA–Protein interactions for RNA: ENST00000474721.1

PIKFYVE-208, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 4

Gene PIKFYVE, Length 538 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-208ENST00000474721 PITX1P78337 314 aaPredicted RBP3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 RUNX2Q13950 521 aa3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 NEDD9Q14511 834 aa3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 SMAD1Q15797 465 aaKnown RBP3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 PPP6R3Q5H9R7 873 aaPredicted RBP3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 SH2D4BQ5SQS7 431 aa3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 SULT6B1Q6IMI4 303 aa3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 IL20RBQ6UXL0 311 aa3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 CADM4Q8NFZ8 388 aa3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 GDPD5Q8WTR4 605 aa3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 KTI12Q96EK9 354 aaPredicted RBP3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 KXD1Q9BQD3 176 aa3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 HERC2P3Q9BVR0 1158 aa3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 TTC12Q9H892 705 aaPredicted RBP3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 NLRC4Q9NPP4 1024 aa3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 LRCH1Q9Y2L9 728 aa3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 XIRP1Q702N8 1843 aaKnown RBP3.21□□□□□ -1.9
PIKFYVE-208ENST00000474721 ARHGEF40Q8TER5 1519 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 PHLPP1O60346 1717 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 A0A087WV62 115 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 DVL1O14640 695 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 HSPA1AP0DMV8 641 aaKnown RBP3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 HSPA1BP0DMV9 641 aaKnown RBP3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 CD58P19256 250 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 CD53P19397 219 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 HNRNPH1P31943 449 aaKnown RBP3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 DVL1P1P54792 670 aaPredicted RBP3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 RELQ04864 619 aaPredicted RBP3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 ITGADQ13349 1161 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 PPIGQ13427 754 aaKnown RBP eCLIP3.2□□□□□ -1.91e-10■□□□□ 10.3
PIKFYVE-208ENST00000474721 KRT72Q14CN4 511 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 EFNB3Q15768 340 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 EDRF1Q3B7T1 1238 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 FBXO43Q4G163 708 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 TMED8Q6PL24 325 aaPredicted RBP3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 PRSS45Q7RTY3 260 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 OR6Y1Q8NGX8 325 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 SPATA22Q8NHS9 363 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 MAGEC3Q8TD91 643 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 CDCA5Q96FF9 252 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 HDAC6Q9UBN7 1215 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 PSAT1Q9Y617 370 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 PLA2R1Q13018 1463 aa3.2□□□□□ -1.9
PIKFYVE-208ENST00000474721 PTPRGP23470 1445 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 AKNAQ7Z591 1439 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 ARHGEF12Q9NZN5 1544 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 SHANK3Q9BYB0 1731 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 AKR1B15C9JRZ8 316 aaPredicted RBP3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 CAND2O75155 1236 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 KRT18P05783 430 aaKnown RBP3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 TUBBP07437 444 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 PCNAP12004 261 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 CD72P21854 359 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 HNF1BP35680 557 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 TMPOP42166 694 aaKnown RBP3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 TERF1P54274 439 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 TUBB4BP68371 445 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 PUM3Q15397 648 aaKnown RBP3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 SOWAHAQ2M3V2 549 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 ZNF876PQ49A33 203 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 ESCO2Q56NI9 601 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 ZNF484Q5JVG2 852 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 PAPPA-AS1Q5QFB9 102 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 PDSS1Q5T2R2 415 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 LYG1Q8N1E2 194 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 PARP16Q8N5Y8 322 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 SLC24A4Q8NFF2 622 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 ERGIC1Q969X5 290 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 LGALS12Q96DT0 336 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 MASTLQ96GX5 879 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 RBM17Q96I25 401 aaKnown RBP3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 ZNF583Q96ND8 569 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 PSMD1Q99460 953 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 LITAFQ99732 161 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 C17orf75Q9HAS0 396 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 PLEKHA5Q9HAU0 1116 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 KLHL1Q9NR64 748 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 DACT1Q9NYF0 836 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 TCOF1Q13428 1488 aaKnown RBP3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 SCAF11Q99590 1463 aaKnown RBP3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 ROBO1Q9Y6N7 1651 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 SIGLEC1Q9BZZ2 1709 aa3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 CDK13Q14004 1512 aaKnown RBP3.19□□□□□ -1.9
PIKFYVE-208ENST00000474721 C3P01024 1663 aa3.18□□□□□ -1.9
PIKFYVE-208ENST00000474721 RAPGEF2Q9Y4G8 1499 aa3.18□□□□□ -1.9
PIKFYVE-208ENST00000474721 PLRG1O43660 514 aaKnown RBP3.18□□□□□ -1.9
PIKFYVE-208ENST00000474721 SRD5A1P18405 259 aa3.18□□□□□ -1.9
PIKFYVE-208ENST00000474721 PDIA3P30101 505 aaKnown RBP3.18□□□□□ -1.9
PIKFYVE-208ENST00000474721 HOXC13P31276 330 aa3.18□□□□□ -1.9
PIKFYVE-208ENST00000474721 KRT2P35908 639 aa3.18□□□□□ -1.9
PIKFYVE-208ENST00000474721 GNL1P36915 607 aaPredicted RBP3.18□□□□□ -1.9
PIKFYVE-208ENST00000474721 USP8P40818 1118 aa3.18□□□□□ -1.9
PIKFYVE-208ENST00000474721 TNFAIP2Q03169 654 aa3.18□□□□□ -1.9
PIKFYVE-208ENST00000474721 SLC18A3Q16572 532 aa3.18□□□□□ -1.9
PIKFYVE-208ENST00000474721 KCNT1Q5JUK3 1230 aa3.18□□□□□ -1.9
PIKFYVE-208ENST00000474721 LIN54Q6MZP7 749 aa3.18□□□□□ -1.9
PIKFYVE-208ENST00000474721 KMT5CQ86Y97 462 aa3.18□□□□□ -1.9
PIKFYVE-208ENST00000474721 ODF3L1Q8IXM7 274 aa3.18□□□□□ -1.9
PIKFYVE-208ENST00000474721 GJC3Q8NFK1 279 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms