RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 TRPM5Q9NZQ8 1165 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 WASF2Q9Y6W5 498 aa11.46□□□□□ -0.57
HPS1-208ENST00000467246 CLDN11O75508 207 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 CIB2O75838 187 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 NDST3O95803 873 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 RHOCP08134 193 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 ITGAXP20702 1163 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 KPNA2P52292 529 aaKnown RBP11.46□□□□□ -0.58
HPS1-208ENST00000467246 EPHB1P54762 984 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 DNAJB13P59910 316 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 ACTR3P61158 418 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 TIAL1Q01085 375 aaKnown RBP eCLIP11.46□□□□□ -0.58
HPS1-208ENST00000467246 TLE2Q04725 743 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 NSUN2Q08J23 767 aaKnown RBP eCLIP11.46□□□□□ -0.58
HPS1-208ENST00000467246 CUL3Q13618 768 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 ARHGEF6Q15052 776 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 TAF11Q15544 211 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 TAF12Q16514 161 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 EML3Q32P44 896 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 C11orf91Q3C1V1 193 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 PPM1LQ5SGD2 360 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 SH2D4BQ5SQS7 431 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 SPOUT1Q5T280 376 aaKnown RBP11.46□□□□□ -0.58
HPS1-208ENST00000467246 NXNQ6DKJ4 435 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 KLHDC10Q6PID8 442 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 PIWIL4Q7Z3Z4 852 aaKnown RBP11.46□□□□□ -0.58
HPS1-208ENST00000467246 CFAP61Q8NHU2 1237 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 VWCEQ96DN2 955 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 MARK4Q96L34 752 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 CYP2S1Q96SQ9 504 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 ALG9Q9H6U8 611 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 TNFRSF12AQ9NP84 129 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 STOML1Q9UBI4 398 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 FIS1Q9Y3D6 152 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 LRRC42Q9Y546 428 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 CHD5Q8TDI0 1954 aa11.46□□□□□ -0.58
HPS1-208ENST00000467246 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.45□□□□□ -0.58
HPS1-208ENST00000467246 F8W8V4 182 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 NPHS1O60500 1241 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 RPP40O75818 363 aaKnown RBP11.45□□□□□ -0.58
HPS1-208ENST00000467246 PDE5AO76074 875 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 IPO13O94829 963 aaKnown RBP11.45□□□□□ -0.58
HPS1-208ENST00000467246 WISP3O95389 354 aaPredicted RBP11.45□□□□□ -0.58
HPS1-208ENST00000467246 PRMT2P55345 433 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 IRX1P78414 480 aaPredicted RBP11.45□□□□□ -0.58
HPS1-208ENST00000467246 ASPHQ12797 758 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 ZNF177Q13360 481 aaPredicted RBP11.45□□□□□ -0.58
HPS1-208ENST00000467246 BTG3Q14201 252 aaPredicted RBP11.45□□□□□ -0.58
HPS1-208ENST00000467246 CYTH1Q15438 398 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 ADGRF1Q5T601 910 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 KLC3Q6P597 504 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 DEFB107AQ8IZN7 70 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 BBS5Q8N3I7 341 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 SCG3Q8WXD2 468 aaKnown RBP11.45□□□□□ -0.58
HPS1-208ENST00000467246 AUTS2Q8WXX7 1259 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 OVCA2Q8WZ82 227 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 PLD4Q96BZ4 506 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 RMDN1Q96DB5 314 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 CATSPER2Q96P56 530 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 RNF208Q9H0X6 261 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 GTSE1Q9NYZ3 720 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 VTI1BQ9UEU0 232 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 YIPF1Q9Y548 306 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 INSIG1O15503 277 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 CR2P20023 1033 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 PIK3R1P27986 724 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 ALDH1A3P47895 512 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 SLC34A1Q06495 639 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 ACAP2Q15057 778 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 TRMT5Q32P41 509 aaKnown RBP11.45□□□□□ -0.58
HPS1-208ENST00000467246 TRIM60Q495X7 471 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 RNF219Q5W0B1 726 aaPredicted RBP11.45□□□□□ -0.58
HPS1-208ENST00000467246 AP1ARQ63HQ0 302 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 LINGO4Q6UY18 593 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 SLC39A5Q6ZMH5 540 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 ANKRD33Q7Z3H0 272 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 ISCA2Q86U28 154 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 LMNTD2Q8IXW0 634 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 OR4L1Q8NH43 312 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 CDKN2AIPNLQ96HQ2 116 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 MYRFLQ96LU7 910 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 CEP295NLQ96MC4 621 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 STX18Q9P2W9 335 aaKnown RBP11.45□□□□□ -0.58
HPS1-208ENST00000467246 CDYLQ9Y232 598 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 PCDHGC4Q9Y5F7 938 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 LAMA3Q16787 3333 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 ILVBLA1L0T0 632 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 SLCO1B7G3V0H7 640 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 PRLP01236 227 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 SOD2P04179 222 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 RBP1P09455 135 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 ARSAP15289 507 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 APLP1P51693 650 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 HK2P52789 917 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 SULT2A1Q06520 285 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 IKBKEQ14164 716 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 PTPRRQ15256 657 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 C6orf163Q5TEZ5 329 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 CXorf57Q6NSI4 855 aaKnown RBP11.45□□□□□ -0.58
HPS1-208ENST00000467246 MRNIPQ6NTE8 343 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms