RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 OR6K2Q8NGY2 324 aa11.68□□□□□ -0.54
NPHP4-204ENST00000460696 OR4L1Q8NH43 312 aa11.68□□□□□ -0.54
NPHP4-204ENST00000460696 FCRL5Q96RD9 977 aa11.68□□□□□ -0.54
NPHP4-204ENST00000460696 ANKRD31Q8N7Z5 1873 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 F5P12259 2224 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 J3KR12 359 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 COL6A2P12110 1019 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 RHOQP17081 205 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 GPR15P49685 360 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 AASDHQ4L235 1098 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-204ENST00000460696 UGT3A1Q6NUS8 523 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 TIFABQ6ZNK6 161 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 LRRC8DQ7L1W4 858 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 PNPLA1Q8N8W4 532 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 UTP4Q969X6 686 aaKnown RBP11.67□□□□□ -0.54
NPHP4-204ENST00000460696 PANX3Q96QZ0 392 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 OXCT2Q9BYC2 517 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-204ENST00000460696 LY75O60449 1722 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 SF3B1O75533 1304 aaKnown RBP eCLIP11.67□□□□□ -0.54
NPHP4-204ENST00000460696 PRKCGP05129 697 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 FAM58BPP0C7Q3 252 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 ATXN8OSP0DMR3 200 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 ETS2P15036 469 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 MLLT1Q03111 559 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-204ENST00000460696 HECTD3Q5T447 861 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 RBM20Q5T481 1227 aaKnown RBP11.67□□□□□ -0.54
NPHP4-204ENST00000460696 TSTD2Q5T7W7 516 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 GPSM1Q86YR5 675 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 MYO1HQ8N1T3 1032 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 CDYL2Q8N8U2 506 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 FBXO27Q8NI29 283 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 ESAMQ96AP7 390 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 RTP4Q96DX8 246 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 ERLEC1Q96DZ1 483 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 NRBF2Q96F24 287 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 C1orf50Q9BV19 199 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 MLPHQ9BV36 600 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-204ENST00000460696 OXSMQ9NWU1 459 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 CLIC5Q9NZA1 410 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 PKD2L2Q9NZM6 624 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 TIMM22Q9Y584 194 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 PCDHB9Q9Y5E1 797 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 DCLK1O15075 740 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 SLC2A4P14672 509 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 CTPS1P17812 591 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 LBPP18428 481 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 ITGALP20701 1170 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 IL2P60568 153 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 FOLH1Q04609 750 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 STXBP5Q5T5C0 1151 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 MFN1Q8IWA4 741 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 ZDHHC2Q9UIJ5 367 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 DNMT3LQ9UJW3 386 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 PRPF19Q9UMS4 504 aaKnown RBP11.67□□□□□ -0.54
NPHP4-204ENST00000460696 PCDHGC4Q9Y5F7 938 aa11.67□□□□□ -0.54
NPHP4-204ENST00000460696 A0A0U1RQF3 1178 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 STX16-NPEPL1H3BU86 382 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 DLX3O60479 287 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 RPL17P18621 184 aaKnown RBP11.66□□□□□ -0.54
NPHP4-204ENST00000460696 HSPA13P48723 471 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 TUFMP49411 452 aaKnown RBP11.66□□□□□ -0.54
NPHP4-204ENST00000460696 CYP51A1Q16850 503 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 LINGO4Q6UY18 593 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 TPGS1Q6ZTW0 290 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 CLYBLQ8N0X4 340 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 CYP2S1Q96SQ9 504 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 GRIP2Q9C0E4 1043 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 CASP8AP2Q9UKL3 1982 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 MOXD2PA6NHM9 499 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 ZNF487B1APH4 448 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 AZIN1O14977 448 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 WEE1P30291 646 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 HCAR3P49019 387 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 SQLEQ14534 574 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 TAZQ16635 292 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 C14orf80Q86SX3 495 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 MRPS31Q92665 395 aaKnown RBP11.66□□□□□ -0.54
NPHP4-204ENST00000460696 HAPLN3Q96S86 360 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 HBEGFQ99075 208 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 WDR83Q9BRX9 315 aaKnown RBP11.66□□□□□ -0.54
NPHP4-204ENST00000460696 DHRS4Q9BTZ2 278 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 PLK2Q9NYY3 685 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 ARVCFO00192 962 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 TRIM38O00635 465 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 HOXA2O43364 376 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 FGF1P05230 155 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 SELPP16109 830 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 HLA-DPA1P20036 260 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 ARHGDIAP52565 204 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 CDC16Q13042 620 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 FAM126BQ8IXS8 530 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 CENPIQ92674 756 aaPredicted RBP11.66□□□□□ -0.54
NPHP4-204ENST00000460696 FAM162AQ96A26 154 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 OSBPL2Q9H1P3 480 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 RUBCNLQ9H714 662 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 ACTR8Q9H981 624 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 SPAG4Q9NPE6 437 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 DDX18Q9NVP1 670 aaKnown RBP11.66□□□□□ -0.54
NPHP4-204ENST00000460696 PSMD13Q9UNM6 376 aa11.66□□□□□ -0.54
NPHP4-204ENST00000460696 SLC45A1Q9Y2W3 748 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms