RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 CCDC157Q569K6 752 aa18.83■□□□□ 0.6
HDAC4-203ENST00000445704 TFDP3Q5H9I0 405 aa18.83■□□□□ 0.6
HDAC4-203ENST00000445704 MACC1Q6ZN28 852 aa18.83■□□□□ 0.6
HDAC4-203ENST00000445704 HSD11B1LQ7Z5J1 315 aa18.83■□□□□ 0.6
HDAC4-203ENST00000445704 KIAA1328Q86T90 577 aa18.83■□□□□ 0.6
HDAC4-203ENST00000445704 RCOR2Q8IZ40 523 aa18.83■□□□□ 0.6
HDAC4-203ENST00000445704 LRRC57Q8N9N7 239 aa18.83■□□□□ 0.6
HDAC4-203ENST00000445704 ZNF548Q8NEK5 533 aaPredicted RBP18.83■□□□□ 0.6
HDAC4-203ENST00000445704 OR4C6Q8NH72 309 aa18.83■□□□□ 0.6
HDAC4-203ENST00000445704 EXD1Q8NHP7 514 aa18.83■□□□□ 0.6
HDAC4-203ENST00000445704 SCRN2Q96FV2 425 aa18.83■□□□□ 0.6
HDAC4-203ENST00000445704 APOOQ9BUR5 198 aa18.83■□□□□ 0.6
HDAC4-203ENST00000445704 CHKBQ9Y259 395 aa18.83■□□□□ 0.6
HDAC4-203ENST00000445704 OR1A2Q9Y585 309 aa18.83■□□□□ 0.6
HDAC4-203ENST00000445704 TDRD6O60522 2096 aaKnown RBP18.83■□□□□ 0.6
HDAC4-203ENST00000445704 ARID1BQ8NFD5 2236 aaPredicted RBP18.82■□□□□ 0.6
HDAC4-203ENST00000445704 PPP1R12AO14974 1030 aaPredicted RBP18.82■□□□□ 0.6
HDAC4-203ENST00000445704 JUNDP17535 347 aa18.82■□□□□ 0.6
HDAC4-203ENST00000445704 CES1P23141 567 aa18.82■□□□□ 0.6
HDAC4-203ENST00000445704 ACADVLP49748 655 aa18.82■□□□□ 0.6
HDAC4-203ENST00000445704 NAP1L1P55209 391 aaKnown RBP18.82■□□□□ 0.6
HDAC4-203ENST00000445704 SKOR1P84550 965 aa18.82■□□□□ 0.6
HDAC4-203ENST00000445704 MTM1Q13496 603 aa18.82■□□□□ 0.6
HDAC4-203ENST00000445704 NFATC4Q14934 902 aa18.82■□□□□ 0.6
HDAC4-203ENST00000445704 PRKD1Q15139 912 aaPredicted RBP18.82■□□□□ 0.6
HDAC4-203ENST00000445704 PROX2Q3B8N5 592 aa18.82■□□□□ 0.6
HDAC4-203ENST00000445704 DENND2CQ68D51 928 aa18.82■□□□□ 0.6
HDAC4-203ENST00000445704 KCTD16Q68DU8 428 aa18.82■□□□□ 0.6
HDAC4-203ENST00000445704 CCDC50Q8IVM0 306 aa18.82■□□□□ 0.6
HDAC4-203ENST00000445704 CBARPQ8N350 705 aaPredicted RBP18.82■□□□□ 0.6
HDAC4-203ENST00000445704 HAUS1Q96CS2 278 aa18.82■□□□□ 0.6
HDAC4-203ENST00000445704 RBM41Q96IZ5 413 aaKnown RBP18.82■□□□□ 0.6
HDAC4-203ENST00000445704 CALR3Q96L12 384 aaKnown RBP18.82■□□□□ 0.6
HDAC4-203ENST00000445704 HERPUD2Q9BSE4 406 aa18.82■□□□□ 0.6
HDAC4-203ENST00000445704 TMEM121BQ9BXQ6 578 aaPredicted RBP18.82■□□□□ 0.6
HDAC4-203ENST00000445704 SEPT10Q9P0V9 454 aa18.82■□□□□ 0.6
HDAC4-203ENST00000445704 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.82■□□□□ 0.6
HDAC4-203ENST00000445704 NEUROG3Q9Y4Z2 214 aa18.82■□□□□ 0.6
HDAC4-203ENST00000445704 PCDHA3Q9Y5H8 950 aa18.82■□□□□ 0.6
HDAC4-203ENST00000445704 A0A0J9YYE9 177 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 H3BM21 787 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 K7ESM1 405 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 TRBC1P01850 177 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 CYP2A6P11509 494 aaPredicted RBP18.81■□□□□ 0.6
HDAC4-203ENST00000445704 TGM2P21980 687 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 HNF1BP35680 557 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 CD86P42081 329 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 PEX5P50542 639 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 ZNF211Q13398 564 aaPredicted RBP18.81■□□□□ 0.6
HDAC4-203ENST00000445704 PPP2R5EQ16537 467 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 CRTC1Q6UUV9 634 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 USP45Q70EL2 814 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 PHACTR4Q8IZ21 702 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 LPCAT1Q8NF37 534 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 NUS1Q96E22 293 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 AGAP3Q96P47 875 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 HEMGNQ9BXL5 484 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 HAUS2Q9NVX0 235 aa18.81■□□□□ 0.6
HDAC4-203ENST00000445704 APOBEC3BQ9UH17 382 aaKnown RBP18.81■□□□□ 0.6
HDAC4-203ENST00000445704 LRP4O75096 1905 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 MACROD2A1Z1Q3 448 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 SCAMP1O15126 338 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 AQP9O43315 295 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 CTNNA2P26232 953 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 ETV3P41162 512 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 NR2C2P49116 596 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 EPHB1P54762 984 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 ALG11Q2TAA5 492 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 LRRC66Q68CR7 880 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 ESRP1Q6NXG1 681 aaKnown RBP18.8■□□□□ 0.6
HDAC4-203ENST00000445704 DHRS13Q6UX07 377 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 RFLNAQ6ZTI6 216 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 BBS12Q6ZW61 710 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 NT5DC3Q86UY8 548 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 KIAA1524Q8TCG1 905 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 LMX1AQ8TE12 382 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 ALG3Q92685 438 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 FUBP1Q96AE4 644 aaKnown RBP18.8■□□□□ 0.6
HDAC4-203ENST00000445704 DTD2Q96FN9 168 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 RBM15Q96T37 977 aaKnown RBP eCLIP18.8■□□□□ 0.6
HDAC4-203ENST00000445704 LRRC61Q9BV99 259 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 BRD8Q9H0E9 1235 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 PCDH9Q9HC56 1237 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 NLGN3Q9NZ94 848 aa18.8■□□□□ 0.6
HDAC4-203ENST00000445704 PTPRBP23467 1997 aa18.79■□□□□ 0.6
HDAC4-203ENST00000445704 FAM221BA6H8Z2 402 aa18.79■□□□□ 0.6
HDAC4-203ENST00000445704 CAPN8A6NHC0 703 aa18.79■□□□□ 0.6
HDAC4-203ENST00000445704 C1QTNF9BB2RNN3 333 aa18.79■□□□□ 0.6
HDAC4-203ENST00000445704 PSMD11O00231 422 aa18.79■□□□□ 0.6
HDAC4-203ENST00000445704 GCATO75600 419 aa18.79■□□□□ 0.6
HDAC4-203ENST00000445704 RFPL3O75679 317 aa18.79■□□□□ 0.6
HDAC4-203ENST00000445704 C1SP09871 688 aa18.79■□□□□ 0.6
HDAC4-203ENST00000445704 C1QTNF9P0C862 333 aa18.79■□□□□ 0.6
HDAC4-203ENST00000445704 MYF5P13349 255 aa18.79■□□□□ 0.6
HDAC4-203ENST00000445704 CKMT2P17540 419 aa18.79■□□□□ 0.6
HDAC4-203ENST00000445704 NFKBIAP25963 317 aa18.79■□□□□ 0.6
HDAC4-203ENST00000445704 PTPN3P26045 913 aa18.79■□□□□ 0.6
HDAC4-203ENST00000445704 CLDN6P56747 220 aa18.79■□□□□ 0.6
HDAC4-203ENST00000445704 PPARDQ03181 441 aa18.79■□□□□ 0.6
HDAC4-203ENST00000445704 C1orf61Q13536 156 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms