RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 H3BMM5 538 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 M0QYT0 321 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 M0R3G1 203 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 NPHS1O60500 1241 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 YBX3P16989 372 aaKnown RBP eCLIP11.58□□□□□ -0.565e-10■□□□□ 9
HMGCS1-202ENST00000433297 NR4A2P43354 598 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 GLUD2P49448 558 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 FKBP1AP62942 108 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 GRSF1Q12849 480 aaKnown RBP eCLIP11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 PPP1R8Q12972 351 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 ESRP1Q6NXG1 681 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 OTOP3Q7RTS5 596 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 MFSD6LQ8IWD5 586 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 AQP12AQ8IXF9 295 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 SPATA22Q8NHS9 363 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 GLMNQ92990 594 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 VPS33AQ96AX1 596 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 KIF12Q96FN5 646 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 MYRFLQ96LU7 910 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 IL12RB2Q99665 862 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 LRRC4Q9HBW1 653 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 SETD4Q9NVD3 440 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 EXD2Q9NVH0 621 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 SARDHQ9UL12 918 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 TRIP11Q15643 1979 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 IQCF3P0C7M6 154 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 SLC13A2Q13183 592 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 MXD4Q14582 209 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 CELF6Q96J87 481 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 TMEM74Q96NL1 305 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 MRPL57Q9BQC6 102 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 MLPHQ9BV36 600 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 B3GNT3Q9Y2A9 372 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 NADKO95544 446 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 KRT75O95678 551 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 ALDOCP09972 364 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 GFAPP14136 432 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 ERCC2P18074 760 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 CAPN3P20807 821 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 ATP6V0D1P61421 351 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 RBP5P82980 135 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 PLIN5Q00G26 463 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 TRIM32Q13049 653 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 LAMC2Q13753 1193 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 MEP1AQ16819 746 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 LY6KQ17RY6 165 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 ZNF470Q6ECI4 717 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 ADCK1Q86TW2 530 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 SULF1Q8IWU6 871 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 IPMKQ8NFU5 416 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 PSMA8Q8TAA3 256 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 KCNN1Q92952 543 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 ZUFSPQ96AP4 578 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 SDCCAG3Q96C92 435 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 FEM1CQ96JP0 617 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 KCTD14Q9BQ13 255 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 TUBA1CQ9BQE3 449 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 AKTIPQ9H8T0 292 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 MEAF6Q9HAF1 191 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 SPC25Q9HBM1 224 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 VTA1Q9NP79 307 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 CASS4Q9NQ75 786 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 SLC2A6Q9UGQ3 507 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 EVLQ9UI08 416 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 ANAPC2Q9UJX6 822 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 FZD10Q9ULW2 581 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 RAD54BQ9Y620 910 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 A8MT66 165 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 FAM72CH0Y354 149 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 AP3B1O00203 1094 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 JRKO75564 520 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 SEC14L2O76054 403 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 UBA1P22314 1058 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 SERPINB1P30740 379 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 RFC2P35250 354 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 SEPHS1P49903 392 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 SNX16P57768 344 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 SELENBP1Q13228 472 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 NFYCQ13952 458 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 TARBP2Q15633 366 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 SLC10A6Q3KNW5 377 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 FAM72AQ5TYM5 149 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 FAM160B1Q5W0V3 765 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 FAM72DQ6L9T8 149 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 FAM72BQ86X60 149 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 TUBGCP3Q96CW5 907 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 GPR78Q96P69 363 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 CHID1Q9BWS9 393 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 MARCH7Q9H992 704 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 ABCB10Q9NRK6 738 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 ACTR3BQ9P1U1 418 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 SNX5Q9Y5X3 404 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 USP3Q9Y6I4 520 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 PPP6CO00743 305 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 PPEF2O14830 753 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 KPNA6O60684 536 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 IPO13O94829 963 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 MT-CYBP00156 380 aaPredicted RBP11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 HTR1BP28222 390 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms