RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 STMN4Q9H169 189 aaPredicted RBP14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 NLE1Q9NVX2 485 aaPredicted RBP14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 STON1Q9Y6Q2 735 aa14.31□□□□□ -0.12
SHMT1P1-201ENST00000419974 GOLGA6L10A6NI86 522 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 LEFTY1O75610 366 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 PIGNO95427 931 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 CTSLP07711 333 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZNF30P17039 623 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 LPOP22079 712 aaPredicted RBP14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 SP100P23497 879 aaPredicted RBP14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 ITGB7P26010 798 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 ARNTP27540 789 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 NMBRP28336 390 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 ATP5DP30049 168 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 HADHAP40939 763 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 SOX9P48436 509 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 EPHB1P54762 984 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 CCINQ13939 588 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 UGP2Q16851 508 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 KBTBD12Q3ZCT8 623 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 SLC44A4Q53GD3 710 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 EMC10Q5UCC4 262 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 EGFLAMQ63HQ2 1017 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 FSTL4Q6MZW2 842 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 ESRP1Q6NXG1 681 aaKnown RBP14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 TRMT10BQ6PF06 316 aaKnown RBP14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 USP45Q70EL2 814 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 KDELC2Q7Z4H8 507 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 SFTPA1Q8IWL2 248 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZNF687Q8N1G0 1237 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 TTC30BQ8N4P2 665 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 GOLGA6L1Q8N7Z2 621 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 MDGA1Q8NFP4 955 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 OR2W6PQ8NHA6 318 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 TTC8Q8TAM2 541 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 FAM131CQ96AQ9 280 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZNF669Q96BR6 464 aaPredicted RBP14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZNF778Q96MU6 729 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 HDAC8Q9BY41 377 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 RSPH9Q9H1X1 276 aaPredicted RBP14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 MFSD1Q9H3U5 465 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 PRSS16Q9NQE7 514 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 HEBP1Q9NRV9 189 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 PSMC3IPQ9P2W1 217 aaPredicted RBP14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 NFKBIL1Q9UBC1 381 aaPredicted RBP14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 WNT16Q9UBV4 365 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 ACTL7BQ9Y614 415 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 MUC6Q6W4X9 2439 aa14.3□□□□□ -0.12
SHMT1P1-201ENST00000419974 WDFY4Q6ZS81 3184 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 RGSL1A5PLK6 1076 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 HMGB1P1B2RPK0 211 aaPredicted RBP14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 H0Y858 1186 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 NTSR1P30989 418 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 SERPINB9P50453 376 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 NUBP1P53384 320 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 CNGA3Q16281 694 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 KRT71Q3SY84 523 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 HSP90B2PQ58FF3 399 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 ARSIQ5FYB1 569 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 TEDDM1Q5T9Z0 273 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 FAM46CQ5VWP2 391 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 GLT6D1Q7Z4J2 308 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZSWIM9Q86XI8 627 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 RYBPQ8N488 228 aaPredicted RBP14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZNF513Q8N8E2 541 aaPredicted RBP14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 OR6K2Q8NGY2 324 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 DCAKDQ8WVC6 231 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 RAB7BQ96AH8 199 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 MTBPQ96DY7 904 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 PPP1R16AQ96I34 528 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 PAFAH2Q99487 392 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 CPNE1Q99829 537 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 CDH19Q9H159 772 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZDHHC6Q9H6R6 413 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 CD248Q9HCU0 757 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 SMYD2Q9NRG4 433 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 IL17CQ9P0M4 197 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 SENP1Q9P0U3 644 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZNF711Q9Y462 761 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 SPO11Q9Y5K1 396 aa14.29□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZDBF2Q9HCK1 2354 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 C1QTNF3-AMACRE9PGA6 284 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 PSMD11O00231 422 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 RPP40O75818 363 aaKnown RBP14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 UGT2B4P06133 528 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 ASGR2P07307 311 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 TIMP2P16035 220 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 GKP32189 559 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 SLC8A1P32418 973 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 HNF1BP35680 557 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 MSH2P43246 934 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 POLD2P49005 469 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 CSE1LP55060 971 aaKnown RBP14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 CREB5Q02930 508 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 ZBTB16Q05516 673 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 LGSNQ5TDP6 509 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 TIFABQ6ZNK6 161 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 KCNMB4Q86W47 210 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 CHPFQ8IZ52 775 aa14.28□□□□□ -0.12
SHMT1P1-201ENST00000419974 IL17RCQ8NAC3 791 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms