RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 NXPE2Q96DL1 559 aa4.8□□□□□ -1.64
PTPRK-210ENST00000415055 TMX3Q96JJ7 454 aa4.8□□□□□ -1.64
PTPRK-210ENST00000415055 TMEM120AQ9BXJ8 343 aa4.8□□□□□ -1.64
PTPRK-210ENST00000415055 RNF26Q9BY78 433 aaPredicted RBP4.8□□□□□ -1.64
PTPRK-210ENST00000415055 TRIM54Q9BYV2 358 aa4.8□□□□□ -1.64
PTPRK-210ENST00000415055 CDT1Q9H211 546 aa4.8□□□□□ -1.64
PTPRK-210ENST00000415055 MRPL46Q9H2W6 279 aaKnown RBP4.8□□□□□ -1.64
PTPRK-210ENST00000415055 PRORYQ9H606 182 aa4.8□□□□□ -1.64
PTPRK-210ENST00000415055 TTC12Q9H892 705 aaPredicted RBP4.8□□□□□ -1.64
PTPRK-210ENST00000415055 SEC61A2Q9H9S3 476 aa4.8□□□□□ -1.64
PTPRK-210ENST00000415055 KCNMB3Q9NPA1 279 aa4.8□□□□□ -1.64
PTPRK-210ENST00000415055 SH3GLB2Q9NR46 395 aa4.8□□□□□ -1.64
PTPRK-210ENST00000415055 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.8□□□□□ -1.64
PTPRK-210ENST00000415055 TUBGCP4Q9UGJ1 667 aa4.8□□□□□ -1.64
PTPRK-210ENST00000415055 TRPS1Q9UHF7 1281 aa4.8□□□□□ -1.64
PTPRK-210ENST00000415055 FBXO9Q9UK97 447 aaPredicted RBP4.8□□□□□ -1.64
PTPRK-210ENST00000415055 KCNJ14Q9UNX9 436 aa4.8□□□□□ -1.64
PTPRK-210ENST00000415055 SIK3Q9Y2K2 1263 aa4.8□□□□□ -1.64
PTPRK-210ENST00000415055 UBR5O95071 2799 aaPredicted RBP4.8□□□□□ -1.64
PTPRK-210ENST00000415055 USP9YO00507 2555 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-210ENST00000415055 TRAV19A0A0A6YYK7 116 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 A0A1B0GVC2 190 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 CPLX1O14810 134 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 OAZ2O95190 189 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 NFATC1O95644 943 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 CER1O95813 267 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 CENPBP07199 599 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-210ENST00000415055 ANXA2P07355 339 aaKnown RBP4.79□□□□□ -1.64
PTPRK-210ENST00000415055 ZNF888P0CJ79 500 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-210ENST00000415055 MTHFD1P11586 935 aaKnown RBP4.79□□□□□ -1.64
PTPRK-210ENST00000415055 ODC1P11926 461 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 KRT10P13645 584 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 JUPP14923 745 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 KCNE1P15382 129 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 IFNAR1P17181 557 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 ATF6P18850 670 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 EEF1GP26641 437 aaKnown RBP4.79□□□□□ -1.64
PTPRK-210ENST00000415055 ETV4P43268 484 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 NAMPTP43490 491 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 ALDH9A1P49189 494 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 EFNA5P52803 228 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 RESTQ13127 1097 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 TOP3AQ13472 1001 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-210ENST00000415055 LY6DQ14210 128 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 MYBPC2Q14324 1141 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 KCNB1Q14721 858 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 NECTIN1Q15223 517 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 CALCRLQ16602 461 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 MPEG1Q2M385 716 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 ADCK5Q3MIX3 580 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 TUBB8Q3ZCM7 444 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 ZACNQ401N2 412 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 PREPLQ4J6C6 727 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-210ENST00000415055 SDHAF4Q5VUM1 108 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 MZT2AQ6P582 158 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 DHRS13Q6UX07 377 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 ALKAL1Q6UXT8 129 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 PIK3AP1Q6ZUJ8 805 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 LARP4Q71RC2 724 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTPRK-210ENST00000415055 CLEC14AQ86T13 490 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 MON1AQ86VX9 555 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 SFTPA1Q8IWL2 248 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 REXO1L1PQ8IX06 675 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 ZCCHC9Q8N567 271 aaKnown RBP4.79□□□□□ -1.64
PTPRK-210ENST00000415055 IL17RCQ8NAC3 791 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 NAXEQ8NCW5 288 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 PPHLN1Q8NEY8 458 aaKnown RBP4.79□□□□□ -1.64
PTPRK-210ENST00000415055 IL17RDQ8NFM7 739 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 ZNF566Q969W8 418 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 IQCDQ96DY2 449 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 NAF1Q96HR8 494 aaKnown RBP4.79□□□□□ -1.64
PTPRK-210ENST00000415055 MPP4Q96JB8 637 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 NT5C1BQ96P26 610 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 CYP2S1Q96SQ9 504 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 VRK1Q99986 396 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-210ENST00000415055 TRIM4Q9C037 500 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 ZNF518BQ9C0D4 1074 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 LINC00597Q9H2U6 94 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 FAM124BQ9H5Z6 455 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-210ENST00000415055 GAREM1Q9H706 876 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 IL21RQ9HBE5 538 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 TMEM8AQ9HCN3 771 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 PDP2Q9P2J9 529 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 PCDHA12Q9UN75 941 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 POLQO75417 2590 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 KIF26BQ2KJY2 2108 aa4.79□□□□□ -1.64
PTPRK-210ENST00000415055 COL5A1P20908 1838 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-210ENST00000415055 ANKRD17O75179 2603 aaKnown RBP4.78□□□□□ -1.64
PTPRK-210ENST00000415055 IGHV1OR15-9A0A0B4J2B8 117 aa4.78□□□□□ -1.64
PTPRK-210ENST00000415055 TBC1D3BA6NDS4 549 aa4.78□□□□□ -1.64
PTPRK-210ENST00000415055 LRRC14BA6NHZ5 514 aa4.78□□□□□ -1.64
PTPRK-210ENST00000415055 BTBD18B2RXH4 712 aa4.78□□□□□ -1.64
PTPRK-210ENST00000415055 M0QZQ0 153 aa4.78□□□□□ -1.64
PTPRK-210ENST00000415055 IRAK2O43187 625 aa4.78□□□□□ -1.64
PTPRK-210ENST00000415055 TLX3O43711 291 aaPredicted RBP4.78□□□□□ -1.64
PTPRK-210ENST00000415055 CBFA2T3O75081 653 aa4.78□□□□□ -1.64
PTPRK-210ENST00000415055 GJB3O75712 270 aa4.78□□□□□ -1.64
PTPRK-210ENST00000415055 INMTO95050 263 aa4.78□□□□□ -1.64
PTPRK-210ENST00000415055 KAT7O95251 611 aa4.78□□□□□ -1.64
PTPRK-210ENST00000415055 LYPLA2O95372 231 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms