RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 A0A1B0GTW7 788 aa25.44■■□□□ 1.66
TMEM55B-202ENST00000398020 LZTS3O60299 673 aaPredicted RBP25.44■■□□□ 1.66
TMEM55B-202ENST00000398020 NDST3O95803 873 aa25.44■■□□□ 1.66
TMEM55B-202ENST00000398020 AGTP01019 485 aa25.44■■□□□ 1.66
TMEM55B-202ENST00000398020 NFKBIAP25963 317 aa25.44■■□□□ 1.66
TMEM55B-202ENST00000398020 HOXD12P35452 270 aa25.44■■□□□ 1.66
TMEM55B-202ENST00000398020 PI4KAP42356 2102 aa25.44■■□□□ 1.66
TMEM55B-202ENST00000398020 CSNK1EP49674 416 aaKnown RBP25.44■■□□□ 1.66
TMEM55B-202ENST00000398020 CRTC1Q6UUV9 634 aa25.44■■□□□ 1.66
TMEM55B-202ENST00000398020 KDM7AQ6ZMT4 941 aa25.44■■□□□ 1.66
TMEM55B-202ENST00000398020 APOL2Q9BQE5 337 aa25.44■■□□□ 1.66
TMEM55B-202ENST00000398020 FICDQ9BVA6 458 aa25.44■■□□□ 1.66
TMEM55B-202ENST00000398020 DMTF1Q9Y222 760 aa25.44■■□□□ 1.66
TMEM55B-202ENST00000398020 AAR2Q9Y312 384 aaKnown RBP25.44■■□□□ 1.66
TMEM55B-202ENST00000398020 GOLGA6L10A0A0M3HER8 536 aa25.43■■□□□ 1.66
TMEM55B-202ENST00000398020 LOC285095A0A1B0GVY8 99 aa25.43■■□□□ 1.66
TMEM55B-202ENST00000398020 H0Y8X5 98 aa25.43■■□□□ 1.66
TMEM55B-202ENST00000398020 HEXIM1O94992 359 aaKnown RBP25.43■■□□□ 1.66
TMEM55B-202ENST00000398020 HNRNPA2B1P22626 353 aaKnown RBP25.43■■□□□ 1.66
TMEM55B-202ENST00000398020 ACTN2P35609 894 aa25.43■■□□□ 1.66
TMEM55B-202ENST00000398020 DPP6P42658 865 aa25.43■■□□□ 1.66
TMEM55B-202ENST00000398020 CLDN2P57739 230 aa25.43■■□□□ 1.66
TMEM55B-202ENST00000398020 SPARCL1Q14515 664 aa25.43■■□□□ 1.66
TMEM55B-202ENST00000398020 DUOXA1Q1HG43 343 aa25.43■■□□□ 1.66
TMEM55B-202ENST00000398020 SIRPB2Q5JXA9 342 aa25.43■■□□□ 1.66
TMEM55B-202ENST00000398020 LRRC66Q68CR7 880 aa25.43■■□□□ 1.66
TMEM55B-202ENST00000398020 NAPEPLDQ6IQ20 393 aa25.43■■□□□ 1.66
TMEM55B-202ENST00000398020 CCDC70Q6NSX1 233 aa25.43■■□□□ 1.66
TMEM55B-202ENST00000398020 C12orf50Q8NA57 414 aaPredicted RBP25.43■■□□□ 1.66
TMEM55B-202ENST00000398020 PRAMEF26H0Y7S4 382 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 USP12O75317 370 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 ATXN1LP0C7T5 689 aaKnown RBP25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 COILP38432 576 aaPredicted RBP25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 TNNT3P45378 269 aaPredicted RBP25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 AFF3P51826 1226 aaKnown RBP25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 RACK1P63244 317 aaKnown RBP25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 ARHGEF7Q14155 803 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 ACOX1Q15067 660 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 CYP1B1Q16678 543 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 CCDC137Q6PK04 289 aaKnown RBP25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 KLF6Q99612 283 aaPredicted RBP25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 DNAH14Q0VDD8 3507 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 PDE2AO00408 941 aaPredicted RBP25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 PHF2O75151 1096 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 ZNF806P0C7X5 589 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 GM2AP17900 193 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 TGM1P22735 817 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 AKT2P31751 481 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 RPL22P35268 128 aaKnown RBP25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 NUDT1P36639 197 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 IRX4P78413 519 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 TRIP13Q15645 432 aaPredicted RBP25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 SLC1A5Q15758 541 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 HSD11B1LQ7Z5J1 315 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 ATL2Q8NHH9 583 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 CEP76Q8TAP6 659 aa25.42■■□□□ 1.66
TMEM55B-202ENST00000398020 GVINP1Q7Z2Y8 2422 aa25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 FAM186AA6NE01 2351 aa25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 C1orf232A0A0U1RR37 186 aa25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 KHNYNO15037 678 aaKnown RBP25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 RECQL5O94762 991 aaPredicted RBP25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 CLDN7O95471 211 aa25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 WNT1P04628 370 aa25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 STAT4Q14765 748 aa25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 SLC23A3Q6PIS1 610 aa25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 ZSCAN30Q86W11 494 aa25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 PDCD7Q8N8D1 485 aaKnown RBP25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 TMEM145Q8NBT3 493 aa25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 DDX47Q9H0S4 455 aaKnown RBP25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 ETNK1Q9HBU6 452 aa25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 MBNL1Q9NR56 388 aaKnown RBP25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 RAB6BQ9NRW1 208 aa25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 SHOC2Q9UQ13 582 aa25.41■■□□□ 1.66
TMEM55B-202ENST00000398020 A0A1B0GVT2 93 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 EPOP01588 193 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 SLC4A1P02730 911 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 CD38P28907 300 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 ADRA1AP35348 466 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 ETV3P41162 512 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 PTSQ03393 145 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 CSRP2Q16527 193 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 GCNT7Q6ZNI0 430 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 RABEPKQ7Z6M1 372 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 ZNF592Q92610 1267 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 PPP1R2P1Q96PQ5 205 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 LYSMD1Q96S90 227 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 CAPN10Q9HC96 672 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 PAK5Q9P286 719 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 SLC6A14Q9UN76 642 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 SPO11Q9Y5K1 396 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 ADAMTS9Q9P2N4 1935 aa25.4■■□□□ 1.66
TMEM55B-202ENST00000398020 POM121BA6NF01 834 aa25.39■■□□□ 1.66
TMEM55B-202ENST00000398020 PRR5-ARHGAP8B1AHC4 643 aa25.39■■□□□ 1.66
TMEM55B-202ENST00000398020 LRP3O75074 770 aa25.39■■□□□ 1.66
TMEM55B-202ENST00000398020 PAFAH1B1P43034 410 aa25.39■■□□□ 1.66
TMEM55B-202ENST00000398020 CDKN3Q16667 212 aa25.39■■□□□ 1.66
TMEM55B-202ENST00000398020 KCTD11Q693B1 232 aa25.39■■□□□ 1.66
TMEM55B-202ENST00000398020 RFLNAQ6ZTI6 216 aa25.39■■□□□ 1.66
TMEM55B-202ENST00000398020 LYSMD3Q7Z3D4 306 aa25.39■■□□□ 1.66
TMEM55B-202ENST00000398020 ALYREFQ86V81 257 aaKnown RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms