RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ARPINQ7Z6K5 226 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 FBXW8Q8N3Y1 598 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 FBXO39Q8N4B4 442 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 DCBLD1Q8N8Z6 715 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 NCLNQ969V3 563 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 CNDP1Q96KN2 507 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 WDR6Q9NNW5 1121 aaKnown RBP10.58□□□□□ -0.72
CALD1-203ENST00000393118 POMPQ9Y244 141 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 PKP3Q9Y446 797 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 A0A0U1RQF3 1178 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 SEPT4O43236 478 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 MBL2P11226 248 aaPredicted RBP10.57□□□□□ -0.72
CALD1-203ENST00000393118 IL10P22301 178 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 PEX2P28328 305 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 CD68P34810 354 aaPredicted RBP10.57□□□□□ -0.72
CALD1-203ENST00000393118 CLCN5P51795 746 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 PRKAA2P54646 552 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 ACTR3P61158 418 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 CDK18Q07002 472 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 TRIM32Q13049 653 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 HECTD2Q5U5R9 776 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 LRRTM3Q86VH5 581 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 ARHGAP39Q9C0H5 1083 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 CATSPERZQ9NTU4 200 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 TRPM5Q9NZQ8 1165 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 UBA2Q9UBT2 640 aaPredicted RBP10.57□□□□□ -0.72
CALD1-203ENST00000393118 ZDHHC2Q9UIJ5 367 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 HS3ST4Q9Y661 456 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 CAPN8A6NHC0 703 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 VPS26AO75436 327 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 CNTN5O94779 1100 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 RPLP2P05387 115 aaKnown RBP10.57□□□□□ -0.72
CALD1-203ENST00000393118 XPAP23025 273 aaPredicted RBP10.57□□□□□ -0.72
CALD1-203ENST00000393118 PLOD1Q02809 727 aaPredicted RBP10.57□□□□□ -0.72
CALD1-203ENST00000393118 RALGDSQ12967 914 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 CUZD1Q86UP6 607 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 ZNF280BQ86YH2 543 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 OR7D4Q8NG98 312 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 SDCCAG3Q96C92 435 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 UROC1Q96N76 676 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 CYP2S1Q96SQ9 504 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 ZBED2Q9BTP6 218 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 TM6SF2Q9BZW4 377 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 TRIM15Q9C019 465 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 OXSMQ9NWU1 459 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 TUBA8Q9NY65 449 aaPredicted RBP10.57□□□□□ -0.72
CALD1-203ENST00000393118 GABRQQ9UN88 632 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 STX16-NPEPL1H3BU86 382 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 DLX3O60479 287 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 KATNA1O75449 491 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 TRIM16O95361 564 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 GUCA1CO95843 209 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 RPL17P18621 184 aaKnown RBP10.57□□□□□ -0.72
CALD1-203ENST00000393118 KCNK10P57789 538 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 PTPRCAPQ14761 206 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 OR52E8Q6IFG1 317 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 SLC24A5Q71RS6 500 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 IFNL1Q8IU54 200 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 CNTD1Q8N815 330 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 CATSPER1Q8NEC5 780 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 RP9Q8TA86 221 aaKnown RBP10.57□□□□□ -0.72
CALD1-203ENST00000393118 DDI1Q8WTU0 396 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 FCRL5Q96RD9 977 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 SLC25A51Q9H1U9 297 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 GIMAP4Q9NUV9 329 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 TAS2R13Q9NYV9 303 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 GJD2Q9UKL4 321 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 ASB3Q9Y575 518 aa10.57□□□□□ -0.72
CALD1-203ENST00000393118 ANKRD12Q6UB98 2062 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 SCN1AP35498 2009 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 MAN1A2O60476 641 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 ATP5C1P36542 298 aaKnown RBP10.56□□□□□ -0.72
CALD1-203ENST00000393118 HCAR3P49019 387 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 CCL23P55773 120 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 PSME3P61289 254 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 RHOAP61586 193 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 CDC16Q13042 620 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 PTPRNQ16849 979 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 TMC5Q6UXY8 1006 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 ACVR1CQ8NER5 493 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 RDH11Q8TC12 318 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 PPP1R14BQ96C90 147 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 NMUR1Q9HB89 426 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 CROTQ9UKG9 612 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 ITGB1BP2Q9UKP3 347 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 KCTD3Q9Y597 815 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 C1orf232A0A0U1RR37 186 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 SAC3D1A6NKF1 404 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 TRMUO75648 421 aaKnown RBP10.56□□□□□ -0.72
CALD1-203ENST00000393118 IPO13O94829 963 aaKnown RBP10.56□□□□□ -0.72
CALD1-203ENST00000393118 ITGBL1O95965 494 aaPredicted RBP10.56□□□□□ -0.72
CALD1-203ENST00000393118 CKMP06732 381 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 GNAZP19086 355 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 ALKAL1Q6UXT8 129 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 NAPRTQ6XQN6 538 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 TMEM135Q86UB9 458 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 ZBTB18Q99592 522 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 SYTL2Q9HCH5 934 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 OLA1Q9NTK5 396 aaKnown RBP10.56□□□□□ -0.72
CALD1-203ENST00000393118 PTTG2Q9NZH5 202 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms