RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 ENC1O14682 589 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 SCAMP1O15126 338 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 PDHA1P08559 390 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 JUNDP17535 347 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 GM2AP17900 193 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 TGM2P21980 687 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 CTNNA1P35221 906 aaKnown RBP11.86□□□□□ -0.51
RFC4-202ENST00000392481 GSDMDP57764 484 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 COPS2P61201 443 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 KIF5AQ12840 1032 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 ZBTB17Q13105 803 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 EIF2B5Q13144 721 aaKnown RBP11.86□□□□□ -0.51
RFC4-202ENST00000392481 ACOX1Q15067 660 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 CNGA3Q16281 694 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 PPP2R5EQ16537 467 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 HS1BP3Q53T59 392 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 KAZNQ674X7 775 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 CCDC50Q8IVM0 306 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.86□□□□□ -0.51
RFC4-202ENST00000392481 LRRC57Q8N9N7 239 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 OR4C6Q8NH72 309 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 BTN2A2Q8WVV5 523 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 COQ10AQ96MF6 247 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 APOOQ9BUR5 198 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 TDRD1Q9BXT4 1180 aaKnown RBP11.86□□□□□ -0.51
RFC4-202ENST00000392481 SAE1Q9UBE0 346 aaPredicted RBP11.86□□□□□ -0.51
RFC4-202ENST00000392481 KLF15Q9UIH9 416 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 NEUROG3Q9Y4Z2 214 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 PCDHGA1Q9Y5H4 931 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 CSNK1G3Q9Y6M4 447 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 A0A0J9YYE9 177 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 CCDC66A2RUB6 948 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 GRID2IPA4D2P6 1211 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 FAM221BA6H8Z2 402 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 GOLGA8CPA6NN73 597 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 PSMD11O00231 422 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 TRIM38O00635 465 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 SIGLEC6O43699 453 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 PRLP01236 227 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 TRBC1P01850 177 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 PCCBP05166 539 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 MMP2P08253 660 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 HOXC4P09017 264 aaPredicted RBP11.86□□□□□ -0.51
RFC4-202ENST00000392481 C1SP09871 688 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 ALPPL2P10696 532 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 CDK4P11802 303 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 PECAM1P16284 738 aaPredicted RBP11.86□□□□□ -0.51
RFC4-202ENST00000392481 SPINK2P20155 84 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 LHCGRP22888 699 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 CTNNA2P26232 953 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 HTR1BP28222 390 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 TRIM23P36406 574 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 CD86P42081 329 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 EPHB1P54762 984 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 ADCY2Q08462 1091 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 ARHGEF7Q14155 803 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 NFATC4Q14934 902 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 PRKD1Q15139 912 aaPredicted RBP11.86□□□□□ -0.51
RFC4-202ENST00000392481 LLGL1Q15334 1064 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 PROX2Q3B8N5 592 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 PLA2G15Q8NCC3 412 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 ZNF548Q8NEK5 533 aaPredicted RBP11.86□□□□□ -0.51
RFC4-202ENST00000392481 ATL2Q8NHH9 583 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 TFB1MQ8WVM0 346 aaKnown RBP11.86□□□□□ -0.51
RFC4-202ENST00000392481 P3H4Q92791 437 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 TBATAQ96M53 351 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 DESI2Q9BSY9 194 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 DUSP23Q9BVJ7 150 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 CAAP1Q9H8G2 361 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 PCDH9Q9HC56 1237 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 NLGN3Q9NZ94 848 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 DNPEPQ9ULA0 475 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 CHKBQ9Y259 395 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 EFR3BQ9Y2G0 817 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 OR1A2Q9Y585 309 aa11.86□□□□□ -0.51
RFC4-202ENST00000392481 CACNA1BQ00975 2339 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 FFAR2O15552 330 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 MTSS1O43312 755 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 AQP9O43315 295 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 ALPIP09923 528 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 GIMD1P0DJR0 217 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 CKMT2P17540 419 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 CTPS1P17812 591 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 PTPN7P35236 360 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 HNF1BP35680 557 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 ACADVLP49748 655 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 BLKP51451 505 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 KIAA1024LP59773 190 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 SKOR1P84550 965 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 PPARDQ03181 441 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 DNAJC3Q13217 504 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 ILKQ13418 452 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 PTPRRQ15256 657 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 TEX44Q53QW1 395 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 FAXCQ5TGI0 409 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 ESRP1Q6NXG1 681 aaKnown RBP11.85□□□□□ -0.51
RFC4-202ENST00000392481 CRTC1Q6UUV9 634 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 BBS12Q6ZW61 710 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 HSD11B1LQ7Z5J1 315 aa11.85□□□□□ -0.51
RFC4-202ENST00000392481 TSPAN33Q86UF1 283 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms