RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 HPS1Q92902 700 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 RIT2Q99578 217 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 SOX17Q9H6I2 414 aaPredicted RBP5.74□□□□□ -1.49
RFC1-202ENST00000381897 TDP1Q9NUW8 608 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 PTTG3PQ9NZH4 202 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 NOCTQ9UK39 431 aaKnown RBP5.74□□□□□ -1.49
RFC1-202ENST00000381897 CLEC4AQ9UMR7 237 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 PLCL2Q9UPR0 1127 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 SNCAIPQ9Y6H5 919 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 A0A075B6Q4 140 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 TCRBV9S1A1TA0A576 114 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 A8MVJ9 347 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 FAM25AB3EWG3 89 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 FAM25CB3EWG5 89 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 FAM25GB3EWG6 89 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 BOLA2-SMG1P6H3BVE0 249 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 APOC4-APOC2K7ER74 178 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 TP73O15350 636 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 TREHO43280 583 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 MFN2O95140 757 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 STAU1O95793 577 aaKnown RBP5.74□□□□□ -1.49
RFC1-202ENST00000381897 APOC2P02655 101 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 MMP2P08253 660 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 DGKAP23743 735 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 SFNP31947 248 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 THPOP40225 353 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 ARL4AP40617 200 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 CDH6P55285 790 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 SLC26A5P58743 744 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 ENPEPQ07075 957 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 EPS8Q12929 822 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 DPYSL3Q14195 570 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 HERC3Q15034 1050 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 KIF19Q2TAC6 998 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 WDR45BQ5MNZ6 344 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 PRICKLE2Q7Z3G6 844 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 CDR2LQ86X02 465 aaPredicted RBP5.74□□□□□ -1.49
RFC1-202ENST00000381897 KBTBD2Q8IY47 623 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 FAM26EQ8N5C1 309 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 DHRSXQ8N5I4 330 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 FAM160A2Q8N612 972 aaPredicted RBP5.74□□□□□ -1.49
RFC1-202ENST00000381897 PPP1R35Q8TAP8 253 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 LRRC15Q8TF66 581 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 LRTOMTQ8WZ04 291 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 HTRA1Q92743 480 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 USP29Q9HBJ7 922 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 AJAP1Q9UKB5 411 aaPredicted RBP5.74□□□□□ -1.49
RFC1-202ENST00000381897 ADAM28Q9UKQ2 775 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 PCDHGA2Q9Y5H1 932 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 SPACA6W5XKT8 324 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 PSMD9O00233 223 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 FBXO21O94952 628 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 CD4P01730 458 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 ZSCAN5DPP0CG00 497 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 TNNI3P19429 210 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 TGM2P21980 687 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 UGT1A1P22309 533 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 DNASE1P24855 282 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 RAB25P57735 213 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 PSMC6P62333 389 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 KLF10Q13118 480 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 SIX1Q15475 284 aaPredicted RBP5.74□□□□□ -1.49
RFC1-202ENST00000381897 ARHGEF16Q5VV41 709 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 TAF2Q6P1X5 1199 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 TSSK4Q6SA08 328 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 Q6ZNX1 250 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 C1orf186Q6ZWK4 172 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 FAM160B2Q86V87 743 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 CCDC103Q8IW40 242 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 SFRP1Q8N474 314 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 SLC9A6Q92581 669 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 MKL1Q969V6 931 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 AP2M1Q96CW1 435 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 REPS1Q96D71 796 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 ART5Q96L15 291 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 DPH2Q9BQC3 489 aaPredicted RBP5.74□□□□□ -1.49
RFC1-202ENST00000381897 FAM213AQ9BRX8 229 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 SLC4A5Q9BY07 1137 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 SEZ6LQ9BYH1 1024 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 MAGEB5Q9BZ81 275 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 POLR1BQ9H9Y6 1135 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 CXorf21Q9HAI6 301 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 EXOSC4Q9NPD3 245 aaKnown RBP5.74□□□□□ -1.49
RFC1-202ENST00000381897 ZNHIT2Q9UHR6 403 aa5.74□□□□□ -1.49
RFC1-202ENST00000381897 TBC1D3DA0A087WVF3 549 aa5.73□□□□□ -1.49
RFC1-202ENST00000381897 TBC1D3IA0A087WXS9 549 aa5.73□□□□□ -1.49
RFC1-202ENST00000381897 TBC1D3EA0A087X179 549 aa5.73□□□□□ -1.49
RFC1-202ENST00000381897 TBC1D3KA0A087X1G2 549 aa5.73□□□□□ -1.49
RFC1-202ENST00000381897 A0A088AWK7 358 aa5.73□□□□□ -1.49
RFC1-202ENST00000381897 CLRN2A0PK11 232 aa5.73□□□□□ -1.49
RFC1-202ENST00000381897 TBC1D3BA6NDS4 549 aa5.73□□□□□ -1.49
RFC1-202ENST00000381897 TBC1D3FA6NER0 549 aaPredicted RBP5.73□□□□□ -1.49
RFC1-202ENST00000381897 TBC1D3LB9A6J9 549 aa5.73□□□□□ -1.49
RFC1-202ENST00000381897 CLDN25C9JDP6 229 aa5.73□□□□□ -1.49
RFC1-202ENST00000381897 IL1AP01583 271 aa5.73□□□□□ -1.49
RFC1-202ENST00000381897 TBC1D3HP0C7X1 549 aa5.73□□□□□ -1.49
RFC1-202ENST00000381897 NCAM1P13591 858 aa5.73□□□□□ -1.49
RFC1-202ENST00000381897 TCN1P20061 433 aaPredicted RBP5.73□□□□□ -1.49
RFC1-202ENST00000381897 PIK3R1P27986 724 aa5.73□□□□□ -1.49
RFC1-202ENST00000381897 RAP2BP61225 183 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms