RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 USP12O75317 370 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 ZMPSTE24O75844 475 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 PEX11BO96011 259 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 MT-CO1P00395 513 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 CTSLP07711 333 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 ACP1P24666 158 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 RBL1P28749 1068 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 MAT2AP31153 395 aaKnown RBP8.26□□□□□ -1.09
MRPL55-211ENST00000366738 KCNJ1P48048 391 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 OXCT1P55809 520 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 EIF3EP60228 445 aaKnown RBP8.26□□□□□ -1.09
MRPL55-211ENST00000366738 PPIDQ08752 370 aaKnown RBP8.26□□□□□ -1.09
MRPL55-211ENST00000366738 AP1B1Q10567 949 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 CNTN1Q12860 1018 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 ZBTB17Q13105 803 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 ELAVL3Q14576 367 aaKnown RBP8.26□□□□□ -1.09
MRPL55-211ENST00000366738 OASLQ15646 514 aaKnown RBP8.26□□□□□ -1.09
MRPL55-211ENST00000366738 C6orf132Q5T0Z8 1188 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 AGBL4Q5VU57 503 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 ZNF783Q6ZMS7 281 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 Q6ZVU0 165 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 PRUNE1Q86TP1 453 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 CACTIN-AS1Q8N1I8 211 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 LZTR1Q8N653 840 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 SNRNP27Q8WVK2 155 aaKnown RBP8.26□□□□□ -1.09
MRPL55-211ENST00000366738 SKA1Q96BD8 255 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 SERAC1Q96JX3 654 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 TMEM121Q9BTD3 319 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 SPON2Q9BUD6 331 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 CEP41Q9BYV8 373 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 DDX47Q9H0S4 455 aaKnown RBP8.26□□□□□ -1.09
MRPL55-211ENST00000366738 MAGEH1Q9H213 219 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 RETREG1Q9H6L5 497 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 SP110Q9HB58 689 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 ASCL3Q9NQ33 180 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 IPO11Q9UI26 975 aaKnown RBP8.26□□□□□ -1.09
MRPL55-211ENST00000366738 PPM1HQ9ULR3 514 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 HEMK1Q9Y5R4 338 aaPredicted RBP8.26□□□□□ -1.09
MRPL55-211ENST00000366738 DOCK9Q9BZ29 2069 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 CREBBPQ92793 2442 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 TBC1D3DA0A087WVF3 549 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 TBC1D3IA0A087WXS9 549 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 TBC1D3EA0A087X179 549 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 TBC1D3KA0A087X1G2 549 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 TBC1D3FA6NER0 549 aaPredicted RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 TBC1D3LB9A6J9 549 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 H7C0C1 242 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 KCNK1O00180 336 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 TLR4O00206 839 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 TERTO14746 1132 aaKnown RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 PPP1R12AO14974 1030 aaPredicted RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 MCF2LO15068 1137 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 SMAD6O43541 496 aaKnown RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 PLRG1O43660 514 aaKnown RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 KDELR3O43731 214 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 PRAMEF11O60813 436 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 PHF2O75151 1096 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 CSO75390 466 aaKnown RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 ZNF821O75541 412 aaPredicted RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 ADH1BP00325 375 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 TBC1D3HP0C7X1 549 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 RBP3P10745 1247 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 SRCP12931 536 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 MYF5P13349 255 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 PAFAH1B1P43034 410 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 ATP5OP48047 213 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 RXRGP48443 463 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 NR2C2P49116 596 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 VASPP50552 380 aaPredicted RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 CLCN6P51797 869 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 YBEYP58557 167 aaPredicted RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 MRPS25P82663 173 aaKnown RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 DAB2P98082 770 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 SLC12A1Q13621 1099 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 PDK1Q15118 436 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 DLG2Q15700 870 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 CYP1B1Q16678 543 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 WHAMMP3Q1A5X7 153 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 SLC45A4Q5BKX6 768 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 CDCP2Q5VXM1 449 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 TBC1D3GQ6DHY5 549 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 TBC1D3CQ6IPX1 549 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 ZNF572Q7Z3I7 529 aaPredicted RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 CDKL3Q8IVW4 592 aaPredicted RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 CCDC117Q8IWD4 279 aaPredicted RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 KLHL7Q8IXQ5 586 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 CCDC13Q8IYE1 715 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 TBC1D3Q8IZP1 549 aaPredicted RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 SH2D3CQ8N5H7 860 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 EXD3Q8N9H8 876 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 GLIS1Q8NBF1 620 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 TTC13Q8NBP0 860 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 CCNYQ8ND76 341 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 SPATA4Q8NEY3 305 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 TFB1MQ8WVM0 346 aaKnown RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 VOPP1Q96AW1 172 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 CCDC114Q96M63 670 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 NAP1L3Q99457 506 aaPredicted RBP8.25□□□□□ -1.09
MRPL55-211ENST00000366738 FAM117AQ9C073 453 aa8.25□□□□□ -1.09
MRPL55-211ENST00000366738 L2HGDHQ9H9P8 463 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms