RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 ZNF500O60304 480 aaPredicted RBP2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 SLC2A4P14672 509 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 ITGA2P17301 1181 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 CLCNKAP51800 687 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 TBX4P57082 545 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 SETQ01105 290 aaPredicted RBP2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 PPIGQ13427 754 aaKnown RBP eCLIP2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 SLC1A5Q15758 541 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 CTXN3Q4LDR2 81 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 RGMBQ6NW40 437 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 JMJD6Q6NYC1 403 aaPredicted RBP2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 SLC36A4Q6YBV0 504 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 ZNF497Q6ZNH5 498 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 TOGARAM2Q6ZUX3 1019 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 KCTD8Q6ZWB6 473 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 KMT5CQ86Y97 462 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 MYLK4Q86YV6 388 aaPredicted RBP2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 KIAA2013Q8IYS2 634 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 TMEM57Q8N5G2 664 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 SCCPDHQ8NBX0 429 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 AGBL3Q8NEM8 1001 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 SVIPQ8NHG7 77 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 SLC20A1Q8WUM9 679 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 AFG1LQ8WV93 481 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 PPM1EQ8WY54 764 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 SNAPC3Q92966 411 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 SH3KBP1Q96B97 665 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 SDCCAG3Q96C92 435 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 CDCA5Q96FF9 252 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 NUF2Q9BZD4 464 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 STN1Q9H668 368 aaKnown RBP2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 PCDH9Q9HC56 1237 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 SMYD2Q9NRG4 433 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 PADI1Q9ULC6 663 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 DNAJC16Q9Y2G8 782 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 KCNK7Q9Y2U2 307 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 AMDHD2Q9Y303 409 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 SMAD5-AS1Q9Y6J3 95 aa2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 PDS5AQ29RF7 1337 aaKnown RBP2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 COL2A1P02458 1487 aaPredicted RBP2.31□□□□□ -2.04
RNU4-42P-201ENST00000364738 PABPN1LA6NDY0 278 aaKnown RBP2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 PEX12O00623 359 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 KLK8O60259 260 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 TK1P04183 234 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 TUBBP07437 444 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 RXRAP19793 462 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 ADD2P35612 726 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 EIF2S3P41091 472 aaKnown RBP2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 DRG2P55039 364 aaKnown RBP2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 CLDN2P57739 230 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 ACTR2P61160 394 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 TUBB4BP68371 445 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 PDSS1Q5T2R2 415 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 STXBP5Q5T5C0 1151 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 ARHGAP17Q68EM7 881 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 LRRC8EQ6NSJ5 796 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 LCTLQ6UWM7 567 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 C17orf99Q6UX52 265 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 CEACAM20Q6UY09 585 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 ZNF852Q6ZMS4 543 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 FAM160B2Q86V87 743 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 WDR63Q8IWG1 891 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 CHERPQ8IWX8 916 aaKnown RBP2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 ADAD2Q8NCV1 583 aaKnown RBP2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 CADM4Q8NFZ8 388 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 OR10V1Q8NGI7 309 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 CEP70Q8NHQ1 597 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 MAGEC3Q8TD91 643 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 DUSP19Q8WTR2 217 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 LGALS12Q96DT0 336 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 SIN3AQ96ST3 1273 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 CLSTN3Q9BQT9 956 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 MXRA8Q9BRK3 442 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 LRRC1Q9BTT6 524 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 MROH8Q9H579 483 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 FAM118AQ9NWS6 357 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 CTNNAL1Q9UBT7 734 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 CARD8Q9Y2G2 431 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 RRP7AQ9Y3A4 280 aaKnown RBP2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 NFE2L3Q9Y4A8 694 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 OBSCNQ5VST9 7968 aa2.3□□□□□ -2.04
RNU4-42P-201ENST00000364738 F5H423 210 aaPredicted RBP2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 BCAT2O15382 392 aaPredicted RBP2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 PLIN1O60240 522 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 FAM155BO75949 473 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 G6PDP11413 515 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 ETFAP13804 333 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 VEGFAP15692 232 aaPredicted RBP2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 EDN2P20800 178 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 S1PR1P21453 382 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 HOXA1P49639 335 aaPredicted RBP2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 CHRNDQ07001 517 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 NAA25Q14CX7 972 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 EIF2S3LQ2VIR3 472 aaKnown RBP2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 TRNP1Q6NT89 227 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 C1orf228Q6PIY5 440 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 MTSS1LQ765P7 747 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 NOXA1Q86UR1 476 aa2.29□□□□□ -2.04
RNU4-42P-201ENST00000364738 FOXRED2Q8IWF2 684 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms