RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 GMCL1P1Q8NEA9 526 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 PNPT1Q8TCS8 783 aaKnown RBP9.79□□□□□ -0.84
CHD3-202ENST00000358181 FANCFQ9NPI8 374 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 ADARB2Q9NS39 739 aaKnown RBP9.79□□□□□ -0.84
CHD3-202ENST00000358181 CUEDC1Q9NWM3 386 aaPredicted RBP9.79□□□□□ -0.84
CHD3-202ENST00000358181 A0A0J9YVX5 310 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 SLC9A3R1O14745 358 aaPredicted RBP9.79□□□□□ -0.84
CHD3-202ENST00000358181 MED24O75448 989 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 PGLSO95336 258 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 VIL1P09327 827 aaKnown RBP9.79□□□□□ -0.84
CHD3-202ENST00000358181 RBP1P09455 135 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 FAM153BP0C7A2 387 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 DNAJA1P31689 397 aaKnown RBP9.79□□□□□ -0.84
CHD3-202ENST00000358181 ACTR3P61158 418 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 SCGB2A2Q13296 93 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 IL18R1Q13478 541 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 NAE1Q13564 534 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 CUL2Q13617 745 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 PTGES3Q15185 160 aaKnown RBP9.79□□□□□ -0.84
CHD3-202ENST00000358181 NDUFA9Q16795 377 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 SLC2A7Q6PXP3 512 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 BEND5Q7L4P6 421 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 SLC41A1Q8IVJ1 513 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 ZNF276Q8N554 614 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 EMC1Q8N766 993 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 DEFB118Q96PH6 123 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 GNPTGQ9UJJ9 305 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 CNOT6Q9ULM6 557 aaKnown RBP9.79□□□□□ -0.84
CHD3-202ENST00000358181 FCER2P06734 321 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 ELFN1P0C7U0 828 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 MSR1P21757 451 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 CDC42P60953 191 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 FOXK1P85037 733 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 IRF8Q02556 426 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 MAP2K5Q13163 448 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 USF2Q15853 346 aaPredicted RBP9.79□□□□□ -0.84
CHD3-202ENST00000358181 ALG10Q5BKT4 473 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 C9orf64Q5T6V5 341 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 NOXRED1Q6NXP6 359 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 SGMS1Q86VZ5 419 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 PLCZ1Q86YW0 608 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 HELQQ8TDG4 1101 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 ZNF473Q8WTR7 871 aaKnown RBP9.79□□□□□ -0.84
CHD3-202ENST00000358181 LPAR1Q92633 364 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 PHF12Q96QT6 1004 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 TMEM8AQ9HCN3 771 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 NR2E1Q9Y466 385 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 IFNGP01579 166 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 ZSCAN5DPP0CG00 497 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 CHMP24386 653 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 FASP25445 335 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 ACLYP53396 1101 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 FAM46CQ5VWP2 391 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 AAGABQ6PD74 315 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 KANSL1Q7Z3B3 1105 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 COMTD1Q86VU5 262 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 HID1Q8IV36 788 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 GALNT11Q8NCW6 608 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 ACTRT2Q8TDY3 377 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 ZNF471Q9BX82 626 aaPredicted RBP9.78□□□□□ -0.84
CHD3-202ENST00000358181 IRF2BPLQ9H1B7 796 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 IQGAP3Q86VI3 1631 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 FAM155AB1AL88 458 aaPredicted RBP9.78□□□□□ -0.84
CHD3-202ENST00000358181 SSX5O60225 188 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 CXCL8P10145 99 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 S100A2P29034 98 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 MANFP55145 182 aaKnown RBP9.78□□□□□ -0.84
CHD3-202ENST00000358181 SRFBP1Q8NEF9 429 aaKnown RBP9.78□□□□□ -0.84
CHD3-202ENST00000358181 FNIP1Q8TF40 1166 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 PURBQ96QR8 312 aaKnown RBP9.78□□□□□ -0.84
CHD3-202ENST00000358181 PNPLA8Q9NP80 782 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 SPATA7Q9P0W8 599 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 USP42Q9H9J4 1324 aaKnown RBP9.78□□□□□ -0.84
CHD3-202ENST00000358181 E9PCH4 1651 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 ADH1CP00326 375 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 MGAT1P26572 445 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 ZNF132P52740 706 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 CDH13P55290 713 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 IL18Q14116 193 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 MLIPQ5VWP3 458 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 GPR139Q6DWJ6 353 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 ZNF730Q6ZMV8 503 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 APTXQ7Z2E3 356 aaKnown RBP9.78□□□□□ -0.84
CHD3-202ENST00000358181 PAGE2Q7Z2X7 111 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 ZNF350Q9GZX5 532 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 KCNF1Q9H3M0 494 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 TAS2R13Q9NYV9 303 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 PCDHAC2Q9Y5I4 1007 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 LOC100509620A0A075B734 347 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 CALCAP01258 141 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 PTX3P26022 381 aaPredicted RBP9.78□□□□□ -0.84
CHD3-202ENST00000358181 QPRTQ15274 297 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 DGUOKQ16854 277 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 CDKL4Q5MAI5 379 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 ZNF470Q6ECI4 717 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 WDR93Q6P2C0 686 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 MPZL3Q6UWV2 235 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 RXFP2Q8WXD0 754 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 PTCD3Q96EY7 689 aaKnown RBP9.78□□□□□ -0.84
CHD3-202ENST00000358181 DCBLD2Q96PD2 775 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms