RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 HOXD9P28356 352 aaPredicted RBP15.88■□□□□ 0.13
PHTF1-201ENST00000357783 MSX2P35548 267 aaPredicted RBP15.88■□□□□ 0.13
PHTF1-201ENST00000357783 KPNA1P52294 538 aaPredicted RBP15.88■□□□□ 0.13
PHTF1-201ENST00000357783 THOP1P52888 689 aa15.88■□□□□ 0.13
PHTF1-201ENST00000357783 C1QTNF8P60827 252 aa15.88■□□□□ 0.13
PHTF1-201ENST00000357783 RPS24P62847 133 aaKnown RBP15.88■□□□□ 0.13
PHTF1-201ENST00000357783 GNA12Q03113 381 aa15.88■□□□□ 0.13
PHTF1-201ENST00000357783 LPCAT4Q643R3 524 aa15.88■□□□□ 0.13
PHTF1-201ENST00000357783 FAM45BPQ6NSW5 357 aa15.88■□□□□ 0.13
PHTF1-201ENST00000357783 CEP70Q8NHQ1 597 aa15.88■□□□□ 0.13
PHTF1-201ENST00000357783 FAM45AQ8TCE6 357 aa15.88■□□□□ 0.13
PHTF1-201ENST00000357783 EXOC2Q96KP1 924 aa15.88■□□□□ 0.13
PHTF1-201ENST00000357783 ZNF512Q96ME7 567 aaPredicted RBP15.88■□□□□ 0.13
PHTF1-201ENST00000357783 NPAS2Q99743 824 aa15.88■□□□□ 0.13
PHTF1-201ENST00000357783 DNMT3LQ9UJW3 386 aa15.88■□□□□ 0.13
PHTF1-201ENST00000357783 PRPF19Q9UMS4 504 aaKnown RBP15.88■□□□□ 0.13
PHTF1-201ENST00000357783 DPPA5A6NC42 116 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 ACSL4O60488 711 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 TRPA1O75762 1119 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 RPP40O75818 363 aaKnown RBP15.87■□□□□ 0.13
PHTF1-201ENST00000357783 GJB5O95377 273 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 PRSS56P0CW18 603 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 HOXD10P28358 340 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 ADSLP30566 484 aaPredicted RBP15.87■□□□□ 0.13
PHTF1-201ENST00000357783 ART3Q13508 389 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 HERC3Q15034 1050 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 GK5Q6ZS86 529 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 ANKS3Q6ZW76 656 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 SDCCAG8Q86SQ7 713 aaPredicted RBP15.87■□□□□ 0.13
PHTF1-201ENST00000357783 ISCA2Q86U28 154 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 RNF148Q8N7C7 305 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 PTERQ96BW5 349 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 SPDL1Q96EA4 605 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 SERPINI1Q99574 410 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 STK39Q9UEW8 545 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 STX16-NPEPL1H3BU86 382 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 SNUPNO95149 360 aaKnown RBP15.87■□□□□ 0.13
PHTF1-201ENST00000357783 ATP5C1P36542 298 aaKnown RBP15.87■□□□□ 0.13
PHTF1-201ENST00000357783 ACVR1Q04771 509 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 PPP1R3AQ16821 1122 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 MRNIPQ6NTE8 343 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 SLC22A9Q8IVM8 553 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 AFAP1L2Q8N4X5 818 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 GSTO2Q9H4Y5 243 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 WDR41Q9HAD4 459 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 DLGAP2Q9P1A6 1054 aa15.87■□□□□ 0.13
PHTF1-201ENST00000357783 SUPT7LO94864 414 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 MT-CO1P00395 513 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 FDXRP22570 491 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 PEX2P28328 305 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 RGRP47804 291 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 ELAVL2Q12926 359 aaKnown RBP15.86■□□□□ 0.13
PHTF1-201ENST00000357783 NOGQ13253 232 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 ACBD5Q5T8D3 534 aaPredicted RBP15.86■□□□□ 0.13
PHTF1-201ENST00000357783 CLEC6AQ6EIG7 209 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 NPAS4Q8IUM7 802 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 DENND1CQ8IV53 801 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 BRSK1Q8TDC3 778 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 TMA16Q96EY4 203 aaKnown RBP15.86■□□□□ 0.13
PHTF1-201ENST00000357783 FAR2Q96K12 515 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 CATSPERZQ9NTU4 200 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 COMMD8Q9NX08 183 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 TCAF2A6NFQ2 919 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 H3BNX3 289 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 UBFD1O14562 309 aaKnown RBP15.86■□□□□ 0.13
PHTF1-201ENST00000357783 XRCC1P18887 633 aaPredicted RBP15.86■□□□□ 0.13
PHTF1-201ENST00000357783 PMLP29590 882 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 DPP6P42658 865 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 SMARCB1Q12824 385 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 KBTBD6Q86V97 674 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 PGAM4Q8N0Y7 254 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 PELI3Q8N2H9 469 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 FBXO22Q8NEZ5 403 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 OR4L1Q8NH43 312 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 GDPD5Q8WTR4 605 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 NSMCE3Q96MG7 304 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 CINPQ9BW66 212 aaPredicted RBP15.86■□□□□ 0.13
PHTF1-201ENST00000357783 EFCAB1Q9HAE3 211 aa15.86■□□□□ 0.13
PHTF1-201ENST00000357783 SCN5AQ14524 2016 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 NDST3O95803 873 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 EPOP01588 193 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 SLC11A2P49281 568 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 SCNN1BP51168 640 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 ATXN3P54252 364 aaPredicted RBP15.85■□□□□ 0.13
PHTF1-201ENST00000357783 TIAL1Q01085 375 aaKnown RBP eCLIP15.85■□□□□ 0.13
PHTF1-201ENST00000357783 TRIP10Q15642 601 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 PIGGQ5H8A4 983 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 BBS5Q8N3I7 341 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 SNX31Q8N9S9 440 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 SEPT8Q92599 483 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 PRICKLE1Q96MT3 831 aaPredicted RBP15.85■□□□□ 0.13
PHTF1-201ENST00000357783 ZNF599Q96NL3 588 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 TRIB3Q96RU7 358 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 MGME1Q9BQP7 344 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 MAGEH1Q9H213 219 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 MEAF6Q9HAF1 191 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 HMX1Q9NP08 348 aaPredicted RBP15.85■□□□□ 0.13
PHTF1-201ENST00000357783 UBA2Q9UBT2 640 aaPredicted RBP15.85■□□□□ 0.13
PHTF1-201ENST00000357783 SEPT3Q9UH03 358 aa15.85■□□□□ 0.13
PHTF1-201ENST00000357783 SPO11Q9Y5K1 396 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms