RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 PCDHGA1Q9Y5H4 931 aa20.28■□□□□ 0.84
HCFC1R1-202ENST00000354679 DUSP10Q9Y6W6 482 aa20.28■□□□□ 0.84
HCFC1R1-202ENST00000354679 ASPMQ8IZT6 3477 aa20.28■□□□□ 0.84
HCFC1R1-202ENST00000354679 FAM221BA6H8Z2 402 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 NEMP2A6NFY4 417 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 NPIPB15A6NHN6 443 aaPredicted RBP20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 SCAMP1O15126 338 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 AQP9O43315 295 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 CST8O60676 142 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 RFPL3O75679 317 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 ZRANB2O95218 330 aaKnown RBP eCLIP20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 GIMD1P0DJR0 217 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 KRT10P13645 584 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 CTPS1P17812 591 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 CA4P22748 312 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 LHCGRP22888 699 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 ACADVLP49748 655 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 NFATC4Q14934 902 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 LLGL1Q15334 1064 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 TFDP3Q5H9I0 405 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 DENND2CQ68D51 928 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 CCDC50Q8IVM0 306 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 PHACTR4Q8IZ21 702 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 RCOR2Q8IZ40 523 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 RBFAQ8N0V3 343 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 NDUFAF2Q8N183 169 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 KRT35Q92764 455 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 RBM41Q96IZ5 413 aaKnown RBP20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 LACRTQ9GZZ8 138 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 NLGN3Q9NZ94 848 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 SEPT10Q9P0V9 454 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 APOBEC3BQ9UH17 382 aaKnown RBP20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 PNMA8BQ9ULN7 279 aaPredicted RBP20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 OR1A2Q9Y585 309 aa20.27■□□□□ 0.84
HCFC1R1-202ENST00000354679 IGF2RP11717 2491 aa20.27■□□□□ 0.83
HCFC1R1-202ENST00000354679 hCG_1818297A0A087WSY0 165 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 PJA2O43164 708 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 ALPIP09923 528 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 CKMT2P17540 419 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 TGM2P21980 687 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 HTR1BP28222 390 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 NR2C2P49116 596 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 EPHB1P54762 984 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 PPARDQ03181 441 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 ARHGEF7Q14155 803 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 PTPRRQ15256 657 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 DHRS13Q6UX07 377 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 UNQ6494/PRO21346Q6UXR6 183 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 BZW1Q7L1Q6 419 aaKnown RBP20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 KIAA1328Q86T90 577 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 TSPAN33Q86UF1 283 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 CNTD1Q8N815 330 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 EXD1Q8NHP7 514 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 LMX1AQ8TE12 382 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 NUS1Q96E22 293 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 DUSP23Q9BVJ7 150 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 CEP41Q9BYV8 373 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 TCEAL2Q9H3H9 227 aaPredicted RBP20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 SAE1Q9UBE0 346 aaPredicted RBP20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 SPASTQ9UBP0 616 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 CHKBQ9Y259 395 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 CSNK1G3Q9Y6M4 447 aa20.26■□□□□ 0.83
HCFC1R1-202ENST00000354679 GOLGA4Q13439 2230 aaKnown RBP20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 A0A0J9YYE9 177 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 GOLGA6L6A8MZA4 724 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 PSMD11O00231 422 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 TRBC1P01850 177 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 MMP2P08253 660 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 C1SP09871 688 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 PECAM1P16284 738 aaPredicted RBP20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 HNF1BP35680 557 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 ETV3P41162 512 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 CD86P42081 329 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 DAB2P98082 770 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 ADCY2Q08462 1091 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 FAM182AQ5T1J6 154 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 FAXCQ5TGI0 409 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 ESRP1Q6NXG1 681 aaKnown RBP20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 B4GALNT4Q76KP1 1039 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 TMPRSS7Q7RTY8 843 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 HSD11B1LQ7Z5J1 315 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 CBARPQ8N350 705 aaPredicted RBP20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 ATL2Q8NHH9 583 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 GATA6Q92908 595 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 TMEM121BQ9BXQ6 578 aaPredicted RBP20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 SLC13A1Q9BZW2 595 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 PCDH9Q9HC56 1237 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 KCTD5Q9NXV2 234 aa20.25■□□□□ 0.83
HCFC1R1-202ENST00000354679 C1QTNF9BB2RNN3 333 aa20.24■□□□□ 0.83
HCFC1R1-202ENST00000354679 K7ESM1 405 aa20.24■□□□□ 0.83
HCFC1R1-202ENST00000354679 CACNB4O00305 520 aaPredicted RBP20.24■□□□□ 0.83
HCFC1R1-202ENST00000354679 PRLP01236 227 aa20.24■□□□□ 0.83
HCFC1R1-202ENST00000354679 C1QTNF9P0C862 333 aa20.24■□□□□ 0.83
HCFC1R1-202ENST00000354679 CDK4P11802 303 aa20.24■□□□□ 0.83
HCFC1R1-202ENST00000354679 ACP1P24666 158 aa20.24■□□□□ 0.83
HCFC1R1-202ENST00000354679 CTNNA1P35221 906 aaKnown RBP20.24■□□□□ 0.83
HCFC1R1-202ENST00000354679 BLKP51451 505 aa20.24■□□□□ 0.83
HCFC1R1-202ENST00000354679 KIAA1024LP59773 190 aa20.24■□□□□ 0.83
HCFC1R1-202ENST00000354679 RPL26P61254 145 aaKnown RBP20.24■□□□□ 0.83
HCFC1R1-202ENST00000354679 SKOR1P84550 965 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms