RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 GM2AP17900 193 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 CTNNA2P26232 953 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 NR2C2P49116 596 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 NAP1L1P55209 391 aaKnown RBP15.46■□□□□ 0.07
VAPA-201ENST00000340541 KIF5AQ12840 1032 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 BNIP3Q12983 259 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 COL9A2Q14055 689 aaPredicted RBP15.46■□□□□ 0.07
VAPA-201ENST00000340541 PRKD1Q15139 912 aaPredicted RBP15.46■□□□□ 0.07
VAPA-201ENST00000340541 PTPRRQ15256 657 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 PPP2R5EQ16537 467 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 WSCD2Q2TBF2 565 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 KAZNQ674X7 775 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 LIPIQ6XZB0 460 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 B4GALNT4Q76KP1 1039 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 PTAR1Q7Z6K3 402 aaPredicted RBP15.46■□□□□ 0.07
VAPA-201ENST00000340541 NT5DC3Q86UY8 548 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 GATAD2AQ86YP4 633 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 PIH1D2Q8WWB5 315 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 ALG3Q92685 438 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 RBM41Q96IZ5 413 aaKnown RBP15.46■□□□□ 0.07
VAPA-201ENST00000340541 MCCC1Q96RQ3 725 aaPredicted RBP15.46■□□□□ 0.07
VAPA-201ENST00000340541 B4GALT6Q9UBX8 382 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.46■□□□□ 0.07
VAPA-201ENST00000340541 PPIL1Q9Y3C6 166 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 RAI2Q9Y5P3 530 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 ADGRG1Q9Y653 693 aa15.46■□□□□ 0.07
VAPA-201ENST00000340541 KNTC1P50748 2209 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 TDRD6O60522 2096 aaKnown RBP15.45■□□□□ 0.06
VAPA-201ENST00000340541 ENC1O14682 589 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 PPP1R12AO14974 1030 aaPredicted RBP15.45■□□□□ 0.06
VAPA-201ENST00000340541 CPP00450 1065 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 PRLP01236 227 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 TGM2P21980 687 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 CES1P23141 567 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 RABIFP47224 123 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 CYP4F3Q08477 520 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 ITKQ08881 620 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 AP1B1Q10567 949 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 FZD2Q14332 565 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 IRF4Q15306 451 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 BBS12Q6ZW61 710 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 PDZD3Q86UT5 571 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 CACTIN-AS1Q8N1I8 211 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 CBARPQ8N350 705 aaPredicted RBP15.45■□□□□ 0.06
VAPA-201ENST00000340541 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.45■□□□□ 0.06
VAPA-201ENST00000340541 PDCD6IPQ8WUM4 868 aaKnown RBP15.45■□□□□ 0.06
VAPA-201ENST00000340541 TDRD1Q9BXT4 1180 aaKnown RBP15.45■□□□□ 0.06
VAPA-201ENST00000340541 CEP41Q9BYV8 373 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 BRD8Q9H0E9 1235 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 PHTF1Q9UMS5 762 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 RAXQ9Y2V3 346 aa15.45■□□□□ 0.06
VAPA-201ENST00000340541 GOLGA4Q13439 2230 aaKnown RBP15.45■□□□□ 0.06
VAPA-201ENST00000340541 BAHCC1Q9P281 2608 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 URB1O60287 2271 aaKnown RBP15.44■□□□□ 0.06
VAPA-201ENST00000340541 A0A087WV48 116 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 SPTY2D1-AS1A0A0U1RR47 76 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 CCDC66A2RUB6 948 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 NPIPB15A6NHN6 443 aaPredicted RBP15.44■□□□□ 0.06
VAPA-201ENST00000340541 A8MX80 341 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 HOXB3P14651 431 aaPredicted RBP15.44■□□□□ 0.06
VAPA-201ENST00000340541 LHCGRP22888 699 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 HNF1BP35680 557 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 COPS2P61201 443 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 ILKQ13418 452 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 LRRC14Q15048 493 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 CNGA3Q16281 694 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 COL28A1Q2UY09 1125 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 ARMC12Q5T9G4 340 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 C19orf48Q6RUI8 117 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 DHRS13Q6UX07 377 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 DCP2Q8IU60 420 aaKnown RBP15.44■□□□□ 0.06
VAPA-201ENST00000340541 CCDC50Q8IVM0 306 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 IFT43Q96FT9 208 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 SCRN2Q96FV2 425 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 CNDP2Q96KP4 475 aaKnown RBP15.44■□□□□ 0.06
VAPA-201ENST00000340541 SMIM14Q96QK8 99 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 C1QTNF7Q9BXJ2 289 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 PNMA8BQ9ULN7 279 aaPredicted RBP15.44■□□□□ 0.06
VAPA-201ENST00000340541 TTLL3Q9Y4R7 772 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 CAPN6Q9Y6Q1 641 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 LAMA5O15230 3695 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 APC2O95996 2303 aa15.44■□□□□ 0.06
VAPA-201ENST00000340541 ARHGAP6O43182 974 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 LZTS3O60299 673 aaPredicted RBP15.43■□□□□ 0.06
VAPA-201ENST00000340541 SDC3O75056 442 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 RFPL3O75679 317 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 RECQL5O94762 991 aaPredicted RBP15.43■□□□□ 0.06
VAPA-201ENST00000340541 HEXIM1O94992 359 aaKnown RBP15.43■□□□□ 0.06
VAPA-201ENST00000340541 ELFN1P0C7U0 828 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 JUPP14923 745 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 VIPR1P32241 457 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 PTPN7P35236 360 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 SKOR1P84550 965 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 WASHC5Q12768 1159 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 EIF2B5Q13144 721 aaKnown RBP15.43■□□□□ 0.06
VAPA-201ENST00000340541 PDE1CQ14123 709 aaPredicted RBP15.43■□□□□ 0.06
VAPA-201ENST00000340541 AADACL2Q6P093 401 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 LRRC8AQ8IWT6 810 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 TXLNBQ8N3L3 684 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 SLC25A45Q8N413 288 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms