RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 KIAA1024LP59773 190 aa17.52■□□□□ 0.4
EXOSC4-201ENST00000316052 IL10RBQ08334 325 aa17.52■□□□□ 0.4
EXOSC4-201ENST00000316052 SLC10A7Q0GE19 358 aa17.52■□□□□ 0.4
EXOSC4-201ENST00000316052 DPYSQ14117 519 aa17.52■□□□□ 0.4
EXOSC4-201ENST00000316052 ZNF571Q7Z3V5 609 aaPredicted RBP17.52■□□□□ 0.4
EXOSC4-201ENST00000316052 TAF8Q7Z7C8 310 aa17.52■□□□□ 0.4
EXOSC4-201ENST00000316052 AOPEPQ8N6M6 819 aa17.52■□□□□ 0.4
EXOSC4-201ENST00000316052 FAM46DQ8NEK8 389 aa17.52■□□□□ 0.4
EXOSC4-201ENST00000316052 CCL4L1Q8NHW4 92 aa17.52■□□□□ 0.4
EXOSC4-201ENST00000316052 SP110Q9HB58 689 aa17.52■□□□□ 0.4
EXOSC4-201ENST00000316052 ATXN7L1Q9ULK2 861 aaPredicted RBP17.52■□□□□ 0.4
EXOSC4-201ENST00000316052 MYO6Q9UM54 1294 aa17.52■□□□□ 0.4
EXOSC4-201ENST00000316052 SPTA1P02549 2419 aa17.52■□□□□ 0.4
EXOSC4-201ENST00000316052 LRRC53A6NM62 1247 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 CACNB4O00305 520 aaPredicted RBP17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 PRPSAP2O60256 369 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 HOXC4P09017 264 aaPredicted RBP17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 ELFN1P0C7U0 828 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 HCAR3P49019 387 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 INHBCP55103 352 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 POLR2LP62875 67 aaKnown RBP17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 RFTN1Q14699 578 aaPredicted RBP17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 ZSCAN23Q3MJ62 389 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 CERCAMQ5T4B2 595 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 E4F1Q66K89 784 aaPredicted RBP17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 PNCKQ6P2M8 343 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 CCDC81Q6ZN84 652 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 CCNJLQ8IV13 435 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 OR6C4Q8NGE1 309 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 PSKH2Q96QS6 385 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 HAUS4Q9H6D7 363 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 CYP4F12Q9HCS2 524 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 RTN4Q9NQC3 1192 aaKnown RBP17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 APPL1Q9UKG1 709 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 PCDHGA7Q9Y5G6 932 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 RNF215Q9Y6U7 377 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 MYO18BQ8IUG5 2567 aa17.51■□□□□ 0.39
EXOSC4-201ENST00000316052 TMX2-CTNND1H3BSU7 103 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 AGRPO00253 132 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 DDX3XO00571 662 aaKnown RBP eCLIP17.5■□□□□ 0.393e-11■■■■□ 19.6
EXOSC4-201ENST00000316052 TNFRSF10CO14798 259 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 LRCH4O75427 683 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 RNF8O76064 485 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 GLB1P16278 677 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 CCKBRP32239 447 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 ZFP36L1Q07352 338 aaKnown RBP17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 EIF3IQ13347 325 aaKnown RBP17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 HLTFQ14527 1009 aaKnown RBP eCLIP17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 LBRQ14739 615 aaKnown RBP17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 ACOX1Q15067 660 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 TGIF1Q15583 401 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 PPP1R2P3Q6NXS1 205 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 TMPRSS9Q7Z410 1059 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 PSTKQ8IV42 348 aaKnown RBP17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 PGBD5Q8N414 524 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 FNIP1Q8TF40 1166 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 COQ10AQ96MF6 247 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 STRADBQ9C0K7 418 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 ETNK2Q9NVF9 386 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 B4GALT6Q9UBX8 382 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 CNOT8Q9UFF9 292 aaKnown RBP17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 SEPT3Q9UH03 358 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 PCDHGC4Q9Y5F7 938 aa17.5■□□□□ 0.39
EXOSC4-201ENST00000316052 BSNQ9UPA5 3926 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 HTRA2O43464 458 aaPredicted RBP17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 PEX11BO96011 259 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 FUCA1P04066 466 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 GZMAP12544 262 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 KRT10P13645 584 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 TCF4P15884 667 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 AMPD1P23109 780 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 IL1R2P27930 398 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 AP1S1P61966 158 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 SRSF6Q13247 344 aaKnown RBP17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 ASIC2Q16515 512 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 C14orf28Q4W4Y0 310 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 SPECC1LQ69YQ0 1117 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 SPRED1Q7Z699 444 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 JAMLQ86YT9 394 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 CBARPQ8N350 705 aaPredicted RBP17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 PAF1Q8N7H5 531 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 TMEM74Q96NL1 305 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 CCNL2Q96S94 520 aaPredicted RBP17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 DPEP2Q9H4A9 486 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 WDR26Q9H7D7 661 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 AIPL1Q9NZN9 384 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 LRIT1Q9P2V4 623 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 MOSPD1Q9UJG1 213 aa17.49■□□□□ 0.39
EXOSC4-201ENST00000316052 CAPN8A6NHC0 703 aa17.48■□□□□ 0.39
EXOSC4-201ENST00000316052 B4DGG1 531 aa17.48■□□□□ 0.39
EXOSC4-201ENST00000316052 PNLIPP16233 465 aa17.48■□□□□ 0.39
EXOSC4-201ENST00000316052 ITIH1P19827 911 aa17.48■□□□□ 0.39
EXOSC4-201ENST00000316052 CR2P20023 1033 aa17.48■□□□□ 0.39
EXOSC4-201ENST00000316052 KELP23276 732 aa17.48■□□□□ 0.39
EXOSC4-201ENST00000316052 RENBPP51606 427 aa17.48■□□□□ 0.39
EXOSC4-201ENST00000316052 TYRO3Q06418 890 aa17.48■□□□□ 0.39
EXOSC4-201ENST00000316052 PTPRRQ15256 657 aa17.48■□□□□ 0.39
EXOSC4-201ENST00000316052 CNGA3Q16281 694 aa17.48■□□□□ 0.39
EXOSC4-201ENST00000316052 TMCO4Q5TGY1 634 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms