RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 WDR5P61964 334 aaKnown RBP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 RBM20Q5T481 1227 aaKnown RBP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 LRRC8EQ6NSJ5 796 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 TMEM154Q6P9G4 183 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 IZUMO2Q6UXV1 221 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 DPP9Q86TI2 863 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 PYDC1Q8WXC3 89 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 TP53INP1Q96A56 240 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 VPS39Q96JC1 886 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 SLC30A3Q99726 388 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 CENPHQ9H3R5 247 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 TUT1Q9H6E5 874 aaKnown RBP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 MARCH4Q9P2E8 410 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 PDP2Q9P2J9 529 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 YBX2Q9Y2T7 364 aaKnown RBP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 IRAK3Q9Y616 596 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 COMMD3-BMI1R4GMX3 469 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 E2F3O00716 465 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 HRO43593 1189 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 SEC14L2O76054 403 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 THRAP10827 490 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 SLC6A2P23975 617 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 PPARGP37231 505 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 MLH1P40692 756 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 PHKA2P46019 1235 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 CRYBB1P53674 252 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 WNT3AP56704 352 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 FOLH1Q04609 750 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 PPIGQ13427 754 aaKnown RBP eCLIP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 MYBPC3Q14896 1274 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 OR4D1Q15615 310 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 PSMD5Q16401 504 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 NADK2Q4G0N4 442 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 SYCP2LQ5T4T6 812 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 EGFL6Q8IUX8 553 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 CCDC71Q8IV32 467 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 LRRC43Q8N309 656 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 AGAP3Q96P47 875 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 NXF2Q9GZY0 626 aaKnown RBP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 TMEFF2Q9UIK5 374 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 MAD1L1Q9Y6D9 718 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 A0A0C4DFX4 3053 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 ABHD14A-ACY1A0A1B0GW23 586 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 E7ENX8 843 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 I3L4J1 428 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 SCN2BO60939 215 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 MAP3K6O95382 1288 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 C1QCP02747 245 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 APRTP07741 180 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 GNAO1P09471 354 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 EZRP15311 586 aaKnown RBP7.86□□□□□ -1.15
CNOT4-201ENST00000315544 SELPP16109 830 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 OXTRP30559 389 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 ACADSBP45954 432 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 NPY2RP49146 381 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 TUBA4AP68366 448 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 TAF11Q15544 211 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 BCL2A1Q16548 175 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 FAM35AQ86V20 835 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 OR6J1Q8NGC5 347 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 TMIGD2Q96BF3 282 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 SAMD11Q96NU1 681 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 VAT1Q99536 393 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 TRIM39Q9HCM9 518 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 KCNK9Q9NPC2 374 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 PAPOLBQ9NRJ5 636 aaKnown RBP7.86□□□□□ -1.15
CNOT4-201ENST00000315544 CROCCQ5TZA2 2017 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 CXorf51AA0A1B0GTR3 108 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 LCHNA4D1U4 455 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 HDAC3O15379 428 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 TREHO43280 583 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 MT-ND3P03897 115 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 MYL3P08590 195 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 NCAM1P13591 858 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 CD247P20963 164 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 HADHAP40939 763 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 TFAMQ00059 246 aaKnown RBP7.86□□□□□ -1.15
CNOT4-201ENST00000315544 GRIK2Q13002 908 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 PPP2R5DQ14738 602 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 HADHQ16836 314 aaKnown RBP7.86□□□□□ -1.15
CNOT4-201ENST00000315544 BBS9Q3SYG4 887 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 CTSL3PQ5NE16 218 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 TAF2Q6P1X5 1199 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 RFX6Q8HWS3 928 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 DENND6AQ8IWF6 608 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 CMTR2Q8IYT2 770 aaKnown RBP7.86□□□□□ -1.15
CNOT4-201ENST00000315544 TTLL2Q9BWV7 592 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 NPLQ9BXD5 320 aaPredicted RBP7.86□□□□□ -1.15
CNOT4-201ENST00000315544 SLC39A8Q9C0K1 460 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 AGO3Q9H9G7 860 aaKnown RBP7.86□□□□□ -1.15
CNOT4-201ENST00000315544 INIPQ9NRY2 104 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 SEPT11Q9NVA2 429 aaKnown RBP7.86□□□□□ -1.15
CNOT4-201ENST00000315544 TUBA8Q9NY65 449 aaPredicted RBP7.86□□□□□ -1.15
CNOT4-201ENST00000315544 TRHDEQ9UKU6 1024 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 HS3ST4Q9Y661 456 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 C15orf38-AP3S2A0A0A6YYH1 394 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 A0A0G2JND7 137 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 MAGEB16A2A368 324 aa7.86□□□□□ -1.15
CNOT4-201ENST00000315544 M0QX08 132 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms