RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PCDH10Q9P2E7 1040 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 E9PBE3 544 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 SMNDC1O75940 238 aaKnown RBP eCLIP8.85□□□□□ -0.99
COL6A5-202ENST00000312481 PTPN5P54829 565 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 UBE2R2Q712K3 238 aaPredicted RBP8.85□□□□□ -0.99
COL6A5-202ENST00000312481 EIF3MQ7L2H7 374 aaKnown RBP8.85□□□□□ -0.99
COL6A5-202ENST00000312481 TAS2R7Q9NYW3 318 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 COL18A1P39060 1754 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 SMCHD1A6NHR9 2005 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 FAM86B1E9PN63 330 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 DYNC1LI2O43237 492 aaPredicted RBP8.85□□□□□ -0.99
COL6A5-202ENST00000312481 FAM86B2P0C5J1 330 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 S100GP29377 79 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 GRIA4P48058 902 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 COX10Q12887 443 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 CDKL4Q5MAI5 379 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 IRF2BP1Q8IU81 584 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 B3GALT6Q96L58 329 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 ATP13A3Q9H7F0 1226 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 CLIC5Q9NZA1 410 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 UPB1Q9UBR1 384 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 ARID2Q68CP9 1835 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 PER2O15055 1255 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 CCNT2O60583 730 aaKnown RBP8.85□□□□□ -0.99
COL6A5-202ENST00000312481 GRAP2O75791 330 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 ZCCHC18P0CG32 403 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 TPP2P29144 1249 aaPredicted RBP8.85□□□□□ -0.99
COL6A5-202ENST00000312481 CHKAP35790 457 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 MAPK10P53779 464 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 HMGCS2P54868 508 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 TBX4P57082 545 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 CYP2U1Q7Z449 544 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 ASZ1Q8WWH4 475 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 FUBP3Q96I24 572 aaKnown RBP eCLIP8.85□□□□□ -0.99
COL6A5-202ENST00000312481 PAIP1Q9H074 479 aaKnown RBP8.85□□□□□ -0.99
COL6A5-202ENST00000312481 STON1Q9Y6Q2 735 aa8.85□□□□□ -0.99
COL6A5-202ENST00000312481 CHD5Q8TDI0 1954 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 SMIM22K7EJ46 135 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 TMPRSS11AQ6ZMR5 421 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 TLK2Q86UE8 772 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 MRPS31Q92665 395 aaKnown RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 BHMTQ93088 406 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 AGAP3Q96P47 875 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 LRRC3Q9BY71 257 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 RNPEPQ9H4A4 650 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 VRTNQ9H8Y1 702 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 RBM22Q9NW64 420 aaKnown RBP eCLIP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 G3V2T6 193 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 MEIS2O14770 477 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 AZIN1O14977 448 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 CDH5P33151 784 aaPredicted RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 ACOX1Q15067 660 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 ZRANB3Q5FWF4 1079 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 CLP1Q92989 425 aaKnown RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 TEX46H3BTG2 121 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 SERPINA3P01011 423 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 SLC4A1P02730 911 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 S100A9P06702 114 aaKnown RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 DPYSL2Q16555 572 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 KIZQ2M2Z5 673 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 KLHL22Q53GT1 634 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 CLVS1Q8IUQ0 354 aaPredicted RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 C7orf43Q8WVR3 580 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 CREB3L1Q96BA8 519 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 SPON2Q9BUD6 331 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 ZFYVE28Q9HCC9 887 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 MID1IP1Q9NPA3 183 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 SEMA3GQ9NS98 782 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 TAF6LQ9Y6J9 622 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 SMIM35A0A1B0GVV1 85 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 OR6C75A6NL08 312 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 FAM47E-STBD1D6RA91 191 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 ZBTB39O15060 712 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 RGS10O43665 173 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 IFNGP01579 166 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 PPM1AP35813 382 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 ALDH7A1P49419 539 aaKnown RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 ZNF45Q02386 682 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 STX4Q12846 297 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 QPRTQ15274 297 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 USP43Q70EL4 1123 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 PHF10Q8WUB8 498 aaKnown RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 MRI1Q9BV20 369 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 PCDHB7Q9Y5E2 793 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 PCDHB5Q9Y5E4 795 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 GLI3P10071 1580 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 LPOP22079 712 aaPredicted RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 EPHB3P54753 998 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 EEFSECP57772 596 aaKnown RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 CPSF7Q8N684 471 aaKnown RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 DNAJB3Q8WWF6 145 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 NMD3Q96D46 503 aaKnown RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 FBXL18Q96ME1 805 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 SYT15Q9BQS2 421 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 SPASTQ9UBP0 616 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 SNRPD1P62314 119 aaKnown RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 INTS7Q9NVH2 962 aaKnown RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 GPRC5DQ9NZD1 345 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 SLC45A1Q9Y2W3 748 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 SCN1AP35498 2009 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms