RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 STYXQ8WUJ0 223 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 EID2BQ96D98 161 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 KIAA1522Q9P206 1035 aaPredicted RBP25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 CDH22Q9UJ99 828 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 RWDD3Q9Y3V2 267 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 ARIH1Q9Y4X5 557 aaPredicted RBP25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 CAPN7Q9Y6W3 813 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 BNIP3LO60238 219 aa25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 MYL2P10916 166 aa25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 RALBP11234 206 aa25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 CCR10P46092 362 aa25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 GPM6BQ13491 265 aa25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 TAF1BQ53T94 588 aaPredicted RBP25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 TRIM42Q8IWZ5 723 aa25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 OR4L1Q8NH43 312 aa25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 ANKRD49Q8WVL7 239 aa25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 VOPP1Q96AW1 172 aa25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 SCYL1Q96KG9 808 aa25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 SORT1Q99523 831 aa25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 FAM96AQ9H5X1 160 aa25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 NLE1Q9NVX2 485 aaPredicted RBP25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 POLR3BQ9NW08 1133 aaPredicted RBP25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 TRIM33Q9UPN9 1127 aa25.7■■□□□ 1.71
SDCCAG3-201ENST00000298537 FZD6O60353 706 aa25.7■■□□□ 1.7
SDCCAG3-201ENST00000298537 GLP2RO95838 553 aa25.7■■□□□ 1.7
SDCCAG3-201ENST00000298537 IL1BP01584 269 aa25.7■■□□□ 1.7
SDCCAG3-201ENST00000298537 HADHAP40939 763 aa25.7■■□□□ 1.7
SDCCAG3-201ENST00000298537 SLC1A6P48664 564 aa25.7■■□□□ 1.7
SDCCAG3-201ENST00000298537 PITRM1Q5JRX3 1037 aa25.7■■□□□ 1.7
SDCCAG3-201ENST00000298537 MTDHQ86UE4 582 aaKnown RBP25.7■■□□□ 1.7
SDCCAG3-201ENST00000298537 SGF29Q96ES7 293 aa25.7■■□□□ 1.7
SDCCAG3-201ENST00000298537 MTIF3Q9H2K0 278 aaKnown RBP25.7■■□□□ 1.7
SDCCAG3-201ENST00000298537 ARFIP2P53365 341 aa25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 SEMG2Q02383 582 aa25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 CSHL1Q14406 222 aa25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 RETSATQ6NUM9 610 aa25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 HEXDCQ8WVB3 486 aa25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 THAP1Q9NVV9 213 aa25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 XPR1Q9UBH6 696 aa25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 FKBPLQ9UIM3 349 aa25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 TGDSO95455 350 aa25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 CRTAMO95727 393 aa25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 TIAL1Q01085 375 aaKnown RBP eCLIP25.69■■□□□ 1.73e-8■■■□□ 19
SDCCAG3-201ENST00000298537 TAF1AQ15573 450 aaPredicted RBP25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 ZNF77Q15935 545 aa25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 TMC5Q6UXY8 1006 aa25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 NAT16Q8N8M0 369 aa25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 BBS2Q9BXC9 721 aa25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 CATSPERZQ9NTU4 200 aa25.69■■□□□ 1.7
SDCCAG3-201ENST00000298537 SERPINE1P05121 402 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 POU4F1Q01851 419 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 ARHGAP15Q53QZ3 475 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 LY6G5CQ5SRR4 150 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 LRRC8EQ6NSJ5 796 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 ZSWIM9Q86XI8 627 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 MICALL1Q8N3F8 863 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 OR6Y1Q8NGX8 325 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 IGSF5Q9NSI5 407 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 PNPOQ9NVS9 261 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 HEY2Q9UBP5 337 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 ANKRD6Q9Y2G4 727 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 DNAJC16Q9Y2G8 782 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 CYBBP04839 570 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 SRCP12931 536 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 CES1P23141 567 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 BNIP1Q12981 228 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 TTC7BQ86TV6 843 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 ALYREFQ86V81 257 aaKnown RBP25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 PIANPQ8IYJ0 282 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 TTC30BQ8N4P2 665 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 ACDQ96AP0 544 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 LRRC37BQ96QE4 947 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 EBF4Q9BQW3 602 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 ADGRE3Q9BY15 652 aa25.68■■□□□ 1.7
SDCCAG3-201ENST00000298537 A8MX80 341 aa25.67■■□□□ 1.7
SDCCAG3-201ENST00000298537 TARM1B6A8C7 271 aa25.67■■□□□ 1.7
SDCCAG3-201ENST00000298537 FSBPO95073 299 aa25.67■■□□□ 1.7
SDCCAG3-201ENST00000298537 SERPINB3P29508 390 aa25.67■■□□□ 1.7
SDCCAG3-201ENST00000298537 CLCN5P51795 746 aa25.67■■□□□ 1.7
SDCCAG3-201ENST00000298537 SLC12A2P55011 1212 aa25.67■■□□□ 1.7
SDCCAG3-201ENST00000298537 ARMC3Q5W041 872 aa25.67■■□□□ 1.7
SDCCAG3-201ENST00000298537 CRLF3Q8IUI8 442 aa25.67■■□□□ 1.7
SDCCAG3-201ENST00000298537 RAB3IL1Q8TBN0 382 aa25.67■■□□□ 1.7
SDCCAG3-201ENST00000298537 PIH1D2Q8WWB5 315 aa25.67■■□□□ 1.7
SDCCAG3-201ENST00000298537 SLCO3A1Q9UIG8 710 aa25.67■■□□□ 1.7
SDCCAG3-201ENST00000298537 VWA7Q9Y334 891 aa25.67■■□□□ 1.7
SDCCAG3-201ENST00000298537 NEMP2A6NFY4 417 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 XYLBO75191 536 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 KLHL2O95198 593 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 RB1P06400 928 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 HOXA9P31269 272 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 NCALDP61601 193 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 PSAPL1Q6NUJ1 521 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 RYBPQ8N488 228 aaPredicted RBP25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 NAT14Q8WUY8 206 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 IRF7Q92985 503 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 RSPRY1Q96DX4 576 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 PLCD4Q9BRC7 762 aa25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 TRAFD1O14545 582 aaPredicted RBP25.66■■□□□ 1.7
SDCCAG3-201ENST00000298537 PENKP01210 267 aaPredicted RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms