RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 RAD51BO15315 384 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 PMPCBO75439 489 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 NDST3O95803 873 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 ALPIP09923 528 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 ZNF30P17039 623 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 CTPS1P17812 591 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 TCP1P17987 556 aaKnown RBP26.97■■□□□ 1.91
SSU72-201ENST00000291386 GEMP55040 296 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 WNT3AP56704 352 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 GRIK2Q13002 908 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 AASDHQ4L235 1098 aaPredicted RBP26.97■■□□□ 1.91
SSU72-201ENST00000291386 PAPD7Q5XG87 772 aaKnown RBP26.97■■□□□ 1.91
SSU72-201ENST00000291386 IL27RAQ6UWB1 636 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 GCNT7Q6ZNI0 430 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 ABI3BPQ7Z7G0 1075 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 RAVER1Q8IY67 606 aaKnown RBP26.97■■□□□ 1.91
SSU72-201ENST00000291386 TP53I13Q8NBR0 393 aaPredicted RBP26.97■■□□□ 1.91
SSU72-201ENST00000291386 IFT43Q96FT9 208 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 MRGPRX2Q96LB1 330 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 NAP1L3Q99457 506 aaPredicted RBP26.97■■□□□ 1.91
SSU72-201ENST00000291386 MLPHQ9BV36 600 aaPredicted RBP26.97■■□□□ 1.91
SSU72-201ENST00000291386 FZD3Q9NPG1 666 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 RXFP3Q9NSD7 469 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 KCTD5Q9NXV2 234 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 ZNF148Q9UQR1 794 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 ANKRD6Q9Y2G4 727 aa26.97■■□□□ 1.91
SSU72-201ENST00000291386 AAR2Q9Y312 384 aaKnown RBP26.97■■□□□ 1.91
SSU72-201ENST00000291386 LZTS3O60299 673 aaPredicted RBP26.96■■□□□ 1.91
SSU72-201ENST00000291386 MAGEC1O60732 1142 aa26.96■■□□□ 1.91
SSU72-201ENST00000291386 GM2AP17900 193 aa26.96■■□□□ 1.91
SSU72-201ENST00000291386 ARHGAP8P85298 464 aa26.96■■□□□ 1.91
SSU72-201ENST00000291386 ARHGEF7Q14155 803 aa26.96■■□□□ 1.91
SSU72-201ENST00000291386 PCSK7Q16549 785 aa26.96■■□□□ 1.91
SSU72-201ENST00000291386 PARP6Q2NL67 630 aa26.96■■□□□ 1.91
SSU72-201ENST00000291386 CRTC1Q6UUV9 634 aa26.96■■□□□ 1.91
SSU72-201ENST00000291386 COG1Q8WTW3 980 aa26.96■■□□□ 1.91
SSU72-201ENST00000291386 RMDN1Q96DB5 314 aa26.96■■□□□ 1.91
SSU72-201ENST00000291386 BMFQ96LC9 184 aa26.96■■□□□ 1.91
SSU72-201ENST00000291386 COQ10AQ96MF6 247 aa26.96■■□□□ 1.91
SSU72-201ENST00000291386 EDEM2Q9BV94 578 aa26.96■■□□□ 1.91
SSU72-201ENST00000291386 COQ6Q9Y2Z9 468 aa26.96■■□□□ 1.91
SSU72-201ENST00000291386 TP53BP1Q12888 1972 aaPredicted RBP26.96■■□□□ 1.91
SSU72-201ENST00000291386 A8MX80 341 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 TLR4O00206 839 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 TOR1BO14657 336 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 FPGTO14772 594 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 PSMB4P28070 264 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 CTSKP43235 329 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 LIMK1P53667 647 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 C21orf59P57076 290 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 GALNT3Q14435 633 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 PRPSAP1Q14558 356 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 CDKN3Q16667 212 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 KIF19Q2TAC6 998 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 HS1BP3Q53T59 392 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 KYAT3Q6YP21 454 aaKnown RBP26.95■■□□□ 1.9
SSU72-201ENST00000291386 ARHGEF18Q6ZSZ5 1173 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 PRELID2Q8N945 189 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 KLHDC7BQ96G42 594 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 MS4A14Q96JA4 679 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 SMIM14Q96QK8 99 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 SRPK1Q96SB4 655 aaKnown RBP26.95■■□□□ 1.9
SSU72-201ENST00000291386 NAPGQ99747 312 aaPredicted RBP26.95■■□□□ 1.9
SSU72-201ENST00000291386 FSCN3Q9NQT6 498 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 GPR27Q9NS67 375 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 CA5BQ9Y2D0 317 aa26.95■■□□□ 1.9
SSU72-201ENST00000291386 A6NNZ2 444 aa26.94■■□□□ 1.9
SSU72-201ENST00000291386 PGRMC1O00264 195 aaKnown RBP26.94■■□□□ 1.9
SSU72-201ENST00000291386 CDX4O14627 284 aaPredicted RBP26.94■■□□□ 1.9
SSU72-201ENST00000291386 RECQL5O94762 991 aaPredicted RBP26.94■■□□□ 1.9
SSU72-201ENST00000291386 ATXN1LP0C7T5 689 aaKnown RBP26.94■■□□□ 1.9
SSU72-201ENST00000291386 NXPH1P58417 271 aa26.94■■□□□ 1.9
SSU72-201ENST00000291386 SNX1Q13596 522 aa26.94■■□□□ 1.9
SSU72-201ENST00000291386 LRRC14Q15048 493 aa26.94■■□□□ 1.9
SSU72-201ENST00000291386 PTPRRQ15256 657 aa26.94■■□□□ 1.9
SSU72-201ENST00000291386 WSCD2Q2TBF2 565 aa26.94■■□□□ 1.9
SSU72-201ENST00000291386 LRRC66Q68CR7 880 aa26.94■■□□□ 1.9
SSU72-201ENST00000291386 CCDC70Q6NSX1 233 aa26.94■■□□□ 1.9
SSU72-201ENST00000291386 LAYNQ6UX15 382 aa26.94■■□□□ 1.9
SSU72-201ENST00000291386 TSPAN33Q86UF1 283 aa26.94■■□□□ 1.9
SSU72-201ENST00000291386 MYOCQ99972 504 aa26.94■■□□□ 1.9
SSU72-201ENST00000291386 MAGEE1Q9HCI5 957 aa26.94■■□□□ 1.9
SSU72-201ENST00000291386 H0Y8X5 98 aa26.93■■□□□ 1.9
SSU72-201ENST00000291386 GDF9O60383 454 aa26.93■■□□□ 1.9
SSU72-201ENST00000291386 CLDN2P57739 230 aa26.93■■□□□ 1.9
SSU72-201ENST00000291386 PFN3P60673 137 aa26.93■■□□□ 1.9
SSU72-201ENST00000291386 PTSQ03393 145 aa26.93■■□□□ 1.9
SSU72-201ENST00000291386 KDELC2Q7Z4H8 507 aa26.93■■□□□ 1.9
SSU72-201ENST00000291386 TECPR1Q7Z6L1 1165 aa26.93■■□□□ 1.9
SSU72-201ENST00000291386 DCP2Q8IU60 420 aaKnown RBP26.93■■□□□ 1.9
SSU72-201ENST00000291386 C17orf53Q8N3J3 647 aaPredicted RBP26.93■■□□□ 1.9
SSU72-201ENST00000291386 TMEM9BQ9NQ34 198 aa26.93■■□□□ 1.9
SSU72-201ENST00000291386 MBNL1Q9NR56 388 aaKnown RBP26.93■■□□□ 1.9
SSU72-201ENST00000291386 SNX11Q9Y5W9 270 aa26.93■■□□□ 1.9
SSU72-201ENST00000291386 CTAGE9A4FU28 777 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 POM121BA6NF01 834 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 F5H423 210 aaPredicted RBP26.92■■□□□ 1.9
SSU72-201ENST00000291386 METTL18O95568 372 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 THEGLP0DJG4 465 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 HLA-DPA1P20036 260 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms