RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CD83Q01151 205 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 SPATA31D4Q6ZUB0 917 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 APTXQ7Z2E3 356 aaKnown RBP7.54□□□□□ -1.2
RIF1-201ENST00000243326 OR4A15Q8NGL6 344 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 RNF157Q96PX1 679 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 SLC9A7Q96T83 725 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 AGXT2Q9BYV1 514 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 TM6SF2Q9BZW4 377 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 ELAC1Q9H777 363 aaKnown RBP7.54□□□□□ -1.2
RIF1-201ENST00000243326 CHADO15335 359 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 MFSD11O43934 449 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 PCDH8O95206 1070 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 NUDT17P0C025 328 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 UGT3A1Q6NUS8 523 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 LINGO1Q96FE5 620 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 LSM7Q9UK45 103 aaKnown RBP7.54□□□□□ -1.2
RIF1-201ENST00000243326 SMIM31A0A1B0GVY4 71 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 GUCY1B2O75343 617 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 DLG1Q12959 904 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 KRR1Q13601 381 aaKnown RBP7.54□□□□□ -1.2
RIF1-201ENST00000243326 PCBP2Q15366 365 aaKnown RBP eCLIP7.54□□□□□ -1.2
RIF1-201ENST00000243326 DCAF12L1Q5VU92 463 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 LIPMQ5VYY2 423 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 EEF1DP3Q658K8 133 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 APOBEC3FQ8IUX4 373 aaKnown RBP7.54□□□□□ -1.2
RIF1-201ENST00000243326 ADPRHL2Q9NX46 363 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 PCDHB7Q9Y5E2 793 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 FRMPD4Q14CM0 1322 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 CCL15-CCL14A0A0B4J2E2 113 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 TK2O00142 265 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 ITGALP20701 1170 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 CCL15Q16663 113 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 PARP6Q2NL67 630 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 LRRC20Q8TCA0 184 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 SHPRHQ149N8 1683 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 NEMP2A6NFY4 417 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 CSH1P0DML2 217 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 CSH2P0DML3 217 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 CETPP11597 493 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 BUD31P41223 144 aaPredicted RBP7.54□□□□□ -1.2
RIF1-201ENST00000243326 HYIQ5T013 277 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 PDCD2LQ9BRP1 358 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 PRDM12Q9H4Q4 367 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 DNAJC28Q9NX36 388 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 PCDH10Q9P2E7 1040 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 MED13LQ71F56 2210 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 HPCAL1P37235 193 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 TRMT10BQ6PF06 316 aaKnown RBP7.54□□□□□ -1.2
RIF1-201ENST00000243326 C10orf82Q8WW14 230 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 C1GALT1C1Q96EU7 318 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 TBX5Q99593 518 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 OPTCQ9UBM4 332 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 SYNPO2Q9UMS6 1093 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 ITGB1P05556 798 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 CDK7P50613 346 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 PTPRNQ16849 979 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 FAM214AQ32MH5 1076 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 CCDC80Q76M96 950 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 BSNDQ8WZ55 320 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 HDAC10Q969S8 669 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 TNNI3P19429 210 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 PHC1P78364 1004 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 SFT2D3Q587I9 215 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 LINGO4Q6UY18 593 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 RAB42Q8N4Z0 105 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 FAM210AQ96ND0 272 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 PKP2Q99959 881 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 SPON1Q9HCB6 807 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 GRHL1Q9NZI5 618 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 NUDT6P53370 316 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 THOC7Q6I9Y2 204 aaKnown RBP7.53□□□□□ -1.2
RIF1-201ENST00000243326 HHIPL2Q6UWX4 724 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 VSTM1Q6UX27 236 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 CRELD2Q6UXH1 353 aaPredicted RBP7.53□□□□□ -1.2
RIF1-201ENST00000243326 SELENOMQ8WWX9 145 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 CCDC126Q96EE4 140 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 PANX3Q96QZ0 392 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 BCLAF3A2AJT9 711 aaKnown RBP7.53□□□□□ -1.2
RIF1-201ENST00000243326 TBX10O75333 385 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 EIF2S1P05198 315 aaKnown RBP7.53□□□□□ -1.2
RIF1-201ENST00000243326 UGT1A6P19224 532 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 UGT1A1P22309 533 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 UGT1A4P22310 534 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 UGT1A3P35503 534 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 UGT1A5P35504 534 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 RHAGQ02094 409 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 LIPEQ05469 1076 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 LSM12Q3MHD2 195 aaKnown RBP7.53□□□□□ -1.2
RIF1-201ENST00000243326 CYP27C1Q4G0S4 372 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 C4orf32Q8N8J7 132 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 TRIT1Q9H3H1 467 aaKnown RBP7.53□□□□□ -1.2
RIF1-201ENST00000243326 TBC1D24Q9ULP9 559 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 ANKRD6Q9Y2G4 727 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 PPP1R11O60927 126 aaPredicted RBP7.53□□□□□ -1.2
RIF1-201ENST00000243326 WFS1O76024 890 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 GRIA1P42261 906 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 STT3AP46977 705 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 ECT2LQ008S8 904 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 CAMK1DQ8IU85 385 aa7.53□□□□□ -1.2
RIF1-201ENST00000243326 BBS4Q96RK4 519 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms