RNA–Protein interactions for RNA: ENST00000231134.7

PCDHB5-201, Transcript of protocadherin beta 5, humanhuman

APPRIS P1 BASIC

Gene PCDHB5, Length 3,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-201ENST00000231134 SPDYE6P0CI01 402 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 PPP2R2BQ00005 443 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 GTF2IRD2BQ6EKJ0 949 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 C15orf39Q6ZRI6 1047 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 TMEM179Q6ZVK1 233 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 PID1Q7Z2X4 250 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 GTF2IRD2Q86UP8 949 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 SLC22A15Q8IZD6 547 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 MFSD4AQ8N468 514 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 PNPT1Q8TCS8 783 aaKnown RBP13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 HCAR2Q8TDS4 363 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 VPS39Q96JC1 886 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 FCRL3Q96P31 734 aaPredicted RBP13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 NODALQ96S42 347 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 RBBP8Q99708 897 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 HPS4Q9NQG7 708 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 MTMR10Q9NXD2 777 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 TOGARAM1Q9Y4F4 1720 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 H0Y626 953 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 K7ERI5 159 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 UGT2B11O75310 529 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 XYLT1Q86Y38 959 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 SLC41A1Q8IVJ1 513 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 CCDC28AQ8IWP9 274 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 ANKRD52Q8NB46 1076 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 TP53I13Q8NBR0 393 aaPredicted RBP13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 NSUN6Q8TEA1 469 aaKnown RBP13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 FAR1Q8WVX9 515 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 TOP1MTQ969P6 601 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 IDI2Q9BXS1 227 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 GLIS2Q9BZE0 524 aaPredicted RBP13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 POMKQ9H5K3 350 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 SMURF2Q9HAU4 748 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 RAVER2Q9HCJ3 691 aaKnown RBP13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 TRMT13Q9NUP7 481 aaKnown RBP13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 ARMC1Q9NVT9 282 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 NYAP2Q9P242 653 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 CRNNQ9UBG3 495 aaPredicted RBP13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 ANAPC2Q9UJX6 822 aa13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 MRPL11Q9Y3B7 192 aaKnown RBP13.71□□□□□ -0.21
PCDHB5-201ENST00000231134 COL18A1P39060 1754 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 SLCO1B7G3V0H7 640 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 TBC1D4O60343 1298 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 DLX3O60479 287 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 SCO1O75880 301 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 HTR2BP41595 481 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 OR2B6P58173 313 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 EPS8Q12929 822 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 TUBA3CQ13748 450 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 GRM3Q14832 879 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 CRY1Q16526 586 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 TKFCQ3LXA3 575 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 RABL3Q5HYI8 236 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 ATAD3CQ5T2N8 411 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 SLC16A12Q6ZSM3 486 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 LEMD2Q8NC56 503 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 TRPV3Q8NET8 790 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 ITCHQ96J02 903 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 DSN1Q9H410 356 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 CPNE5Q9HCH3 593 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 UBP1Q9NZI7 540 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 NARFQ9UHQ1 456 aa13.71□□□□□ -0.22
PCDHB5-201ENST00000231134 KRT87PA6NCN2 255 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 KCNK1O00180 336 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 CDK2AP1O14519 115 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 ATXN1P54253 815 aaKnown RBP13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 BCAT1P54687 386 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 SLC12A2P55011 1212 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 YBX1P67809 324 aaKnown RBP13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 HIST2H2ACQ16777 129 aaPredicted RBP13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 PXDC1Q5TGL8 231 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 BTBD8Q5XKL5 378 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 APOBEC3HQ6NTF7 200 aaKnown RBP13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 CNSTQ6PJW8 725 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 LYSMD2Q8IV50 215 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 ABI1Q8IZP0 508 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 OR6Q1Q8NGQ2 317 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 UHRF1Q96T88 793 aaPredicted RBP13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 FEM1AQ9BSK4 669 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 SNRNP25Q9BV90 132 aaKnown RBP13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 NIF3L1Q9GZT8 377 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 CHST12Q9NRB3 414 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 RGS13O14921 159 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 ACOX3O15254 700 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 SSX4O60224 188 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 CPNE3O75131 537 aaKnown RBP13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 LRIG2O94898 1065 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 GFAPP14136 432 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 BDNFP23560 247 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 AXLP30530 894 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 HADHAP40939 763 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 LIMK2P53671 638 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 GJA9P57773 515 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 C1QTNF8P60827 252 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 IL5RAQ01344 420 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 IFRD2Q12894 506 aaPredicted RBP13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 SQLEQ14534 574 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 FAM83EQ2M2I3 478 aa13.7□□□□□ -0.22
PCDHB5-201ENST00000231134 COLGALT2Q8IYK4 626 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms