RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 CCDC6Q16204 474 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 KHDC1Q4VXA5 237 aaKnown RBP16.91■□□□□ 0.3
GAPDH-201ENST00000229239 ACSBG2Q5FVE4 666 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 RBM20Q5T481 1227 aaKnown RBP16.91■□□□□ 0.3
GAPDH-201ENST00000229239 VWA5B1Q5TIE3 1220 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 IL31Q6EBC2 164 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.91■□□□□ 0.3
GAPDH-201ENST00000229239 TMCO2Q7Z6W1 182 aaPredicted RBP16.91■□□□□ 0.3
GAPDH-201ENST00000229239 SDCCAG8Q86SQ7 713 aaPredicted RBP16.91■□□□□ 0.3
GAPDH-201ENST00000229239 ULK2Q8IYT8 1036 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 TRIB3Q96RU7 358 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 ZBED2Q9BTP6 218 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 CINPQ9BW66 212 aaPredicted RBP16.91■□□□□ 0.3
GAPDH-201ENST00000229239 GPAMQ9HCL2 828 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 A0A0C4DFX4 3053 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 MUSKO15146 869 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 TLL1O43897 1013 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 PSMG1O95456 288 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 CA3P07451 260 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 CHRNGP07510 517 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 THRAP10827 490 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 PSMA3P25788 255 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 ALDH1A3P47895 512 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 SATB1Q01826 763 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 VEPH1Q14D04 833 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 ACCSLQ4AC99 568 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 SLC9B1Q4ZJI4 515 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 PPP2R2DQ66LE6 453 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 TLDC1Q6P9B6 456 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 PTAR1Q7Z6K3 402 aaPredicted RBP16.9■□□□□ 0.3
GAPDH-201ENST00000229239 CFAP52Q8N1V2 620 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 CPSF7Q8N684 471 aaKnown RBP16.9■□□□□ 0.3
GAPDH-201ENST00000229239 MYLIPQ8WY64 445 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 OLFM1Q99784 485 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 CLSTN3Q9BQT9 956 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 STOML2Q9UJZ1 356 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 ARHGAP26Q9UNA1 814 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 CDYLQ9Y232 598 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 TBC1D30Q9Y2I9 924 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 PRUNE2Q8WUY3 3088 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 A0A0D9SEW6 157 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 AURKAO14965 403 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 STC2O76061 302 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 LUC7L3O95232 432 aaKnown RBP16.9■□□□□ 0.3
GAPDH-201ENST00000229239 GJB5O95377 273 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 RHOCP08134 193 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 ARSDP51689 593 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 ACTR3P61158 418 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 DSG1Q02413 1049 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 SLC34A1Q06495 639 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 KLF10Q13118 480 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 CSHL1Q14406 222 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 ADGRF1Q5T601 910 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 DENND1CQ8IV53 801 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 LSMEM2Q8N112 164 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 PRICKLE1Q96MT3 831 aaPredicted RBP16.9■□□□□ 0.3
GAPDH-201ENST00000229239 RTKNQ9BST9 563 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 THTPAQ9BU02 230 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 HERC2P3Q9BVR0 1158 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 VN1R3Q9BXE9 311 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 BATF3Q9NR55 127 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 NDE1Q9NXR1 346 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 ANGPTL2Q9UKU9 493 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 VPS9D1Q9Y2B5 631 aa16.9■□□□□ 0.3
GAPDH-201ENST00000229239 CHD5Q8TDI0 1954 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 INSIG1O15503 277 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 GRID2O43424 1007 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 FKBP6O75344 327 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 IPO13O94829 963 aaKnown RBP16.89■□□□□ 0.29
GAPDH-201ENST00000229239 CR2P20023 1033 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 CORO1AP31146 461 aaKnown RBP16.89■□□□□ 0.29
GAPDH-201ENST00000229239 SUOXP51687 545 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 HERC3Q15034 1050 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 ZNF789Q5FWF6 425 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 AAGABQ6PD74 315 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 TRIM67Q6ZTA4 783 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 OR7D4Q8NG98 312 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 FBXO27Q8NI29 283 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 MAPK15Q8TD08 544 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 BLOC1S5Q8TDH9 187 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 ACTRT2Q8TDY3 377 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 TCF12Q99081 682 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 NDNQ99608 321 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 KLF16Q9BXK1 252 aaPredicted RBP16.89■□□□□ 0.29
GAPDH-201ENST00000229239 POMKQ9H5K3 350 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 INTS10Q9NVR2 710 aaKnown RBP16.89■□□□□ 0.29
GAPDH-201ENST00000229239 ZDHHC2Q9UIJ5 367 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 YIPF1Q9Y548 306 aa16.89■□□□□ 0.29
GAPDH-201ENST00000229239 CCDC189A1A4V9 331 aa16.88■□□□□ 0.29
GAPDH-201ENST00000229239 PFDN6O15212 129 aa16.88■□□□□ 0.29
GAPDH-201ENST00000229239 CD3EAPO15446 510 aaKnown RBP16.88■□□□□ 0.29
GAPDH-201ENST00000229239 CCNT2O60583 730 aaKnown RBP16.88■□□□□ 0.29
GAPDH-201ENST00000229239 SEC24AO95486 1093 aa16.88■□□□□ 0.29
GAPDH-201ENST00000229239 CCDC166P0CW27 439 aa16.88■□□□□ 0.29
GAPDH-201ENST00000229239 VHLP40337 213 aa16.88■□□□□ 0.29
GAPDH-201ENST00000229239 PTDSS1P48651 473 aaKnown RBP16.88■□□□□ 0.29
GAPDH-201ENST00000229239 TAF12Q16514 161 aa16.88■□□□□ 0.29
GAPDH-201ENST00000229239 TXNDC5Q8NBS9 432 aaKnown RBP16.88■□□□□ 0.29
GAPDH-201ENST00000229239 RP9Q8TA86 221 aaKnown RBP16.88■□□□□ 0.29
GAPDH-201ENST00000229239 WDR60Q8WVS4 1066 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms