RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 PARP15Q460N3 678 aa11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 MYLK4Q86YV6 388 aaPredicted RBP11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 ZNF398Q8TD17 642 aa11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 CHRAC1Q9NRG0 131 aa11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 C20orf96Q9NUD7 363 aaPredicted RBP11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 HSFX1Q9UBD0 423 aa11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 SOX13Q9UN79 622 aa11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 LZTS1Q9Y250 596 aa11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 FRMPD3Q5JV73 1810 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 PDCD11Q14690 1871 aaKnown RBP11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 A8MX80 341 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 SUPT3HO75486 399 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 CLPTM1O96005 669 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 ITGA2BP08514 1039 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 ERVK-10P10266 1014 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 CD68P34810 354 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 HTR7P34969 479 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 VIPR2P41587 438 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 YBEYP58557 167 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 MSLNQ13421 630 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 LSAMPQ13449 338 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 HNRNPDQ14103 355 aaKnown RBP11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 FSCBQ5H9T9 825 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 ZFYVE19Q96K21 471 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 POLR1EQ9GZS1 481 aaKnown RBP11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 LRRC40Q9H9A6 602 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 PNPOQ9NVS9 261 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 RPL26L1Q9UNX3 145 aaKnown RBP11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 COMMD3-BMI1R4GMX3 469 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 VWA8A3KMH1 1905 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 BRWD1Q9NSI6 2320 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 A0A088AWK7 358 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 ZNF197O14709 1029 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 DCXO43602 365 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 GJB3O75712 270 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 SERPINF2P08697 491 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 CSKP41240 450 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 CDH17Q12864 832 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 CAMK1Q14012 370 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 KRT72Q14CN4 511 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 CNGA3Q16281 694 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 HSP90AA5PQ58FG0 334 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 LGSNQ5TDP6 509 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 TRMT10BQ6PF06 316 aaKnown RBP11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 UMODL1-AS1Q8N2C9 162 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 GSDMBQ8TAX9 411 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 ITFG1Q8TB96 612 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 ZSCAN18Q8TBC5 510 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 USP13Q92995 863 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 MFSD3Q96ES6 412 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 CEP295NLQ96MC4 621 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 TBL1YQ9BQ87 522 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 TASP1Q9H6P5 420 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 FCF1Q9Y324 198 aaKnown RBP11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 PCDHGC4Q9Y5F7 938 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 PCDHA11Q9Y5I1 949 aa11.77□□□□□ -0.53
TNFAIP1-201ENST00000226225 F5P12259 2224 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 FOXD2O60548 495 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 AP2A1O95782 977 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 UQCRBP14927 111 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 CD1EP15812 388 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 MAPKAPK2P49137 400 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 ZXDBP98169 803 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 MTA1Q13330 715 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 GALNT3Q14435 633 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 DNAL1Q4LDG9 190 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 TMCO4Q5TGY1 634 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 ATG16L1Q676U5 607 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 KLHDC10Q6PID8 442 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 RELL1Q8IUW5 271 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 OR52K2Q8NGK3 314 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 PRICKLE1Q96MT3 831 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 EBNA1BP2Q99848 306 aaKnown RBP11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 FRMD8Q9BZ67 464 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 ABCB8Q9NUT2 735 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 PLA2G4CQ9UP65 541 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 APOBEC2Q9Y235 224 aaKnown RBP11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 DTNAQ9Y4J8 743 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 A0A1B0GTW7 788 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 H3BNC9 293 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 KRT37O76014 449 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 CRABP2P29373 138 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 SERPINB5P36952 375 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 ETV4P43268 484 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 MRPS22P82650 360 aaKnown RBP11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 SERINC3Q13530 473 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 RAB30Q15771 203 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 C6orf52Q5T4I8 152 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 ACBD5Q5T8D3 534 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 UNC5AQ6ZN44 842 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 PDSS2Q86YH6 399 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 MIPOL1Q8TD10 442 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 MZB1Q8WU39 189 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 ALKBH8Q96BT7 664 aaKnown RBP11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 PRKD2Q9BZL6 878 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 MAGEH1Q9H213 219 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 NOL6Q9H6R4 1146 aaKnown RBP11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 SCUBE2Q9NQ36 999 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 IGSF9Q9P2J2 1179 aa11.76□□□□□ -0.53
TNFAIP1-201ENST00000226225 SEPT3Q9UH03 358 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms