RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Fzd5Q9EQD0 585 aa9.98□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Gm14459A2BI73 179 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Casp2P29594 452 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Cav1P49817 178 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Iffo1Q8BXL9 562 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 4932411N23RikQ8C0S0 470 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Fem1cQ8CEF1 617 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Fnbp1lQ8K012 605 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Gfm2Q8R2Q4 779 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 CtsmQ9JL96 333 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Bex2Q9WTZ8 129 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Cdc7Q9Z0H0 564 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 PbsnO08976 174 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Man1a1P45700 655 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Cbx1P83917 185 aaKnown RBP9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Rgs9bpQ148R9 237 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Ccdc127Q3TC33 260 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Rnf40Q3U319 1001 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Tmprss11aQ3UQ41 389 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Prkaa1Q5EG47 559 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 SynaQ5G5D5 617 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Spata24Q6P926 205 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 LnpkQ7TQ95 425 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Rpp38Q80UU2 280 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Rassf2Q8BMS9 326 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Sh2d5Q8JZW5 429 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Spp2Q8K1I3 203 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Fam13bQ8K2H3 851 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Hid1Q8R1F6 788 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Mtfr2Q8VED8 361 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Krt7Q9DCV7 457 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Chd3B1AR17 2055 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Unc13cQ8K0T7 2210 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Gprin2D3Z1D7 455 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Kifc5bE9PUA5 672 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Gm7942L7N277 499 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Smad6O35182 495 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Sult3a1O35403 293 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 ChadO55226 358 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Psma3O70435 255 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 MagohP61327 146 aaKnown RBP9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Q3UTZ3 580 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Kdm7aQ3UWM4 940 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 E330034G19RikQ3UWX6 351 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Garnl3Q3V0G7 1038 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Slc22a16Q497L8 649 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Nxpe4Q52KP5 543 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Smad2Q62432 467 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Ripor1Q68FE6 1223 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Cyp2d40Q6P8N9 338 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Ddx51Q6P9R1 639 aaKnown RBP9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Q80WR5 230 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Pggt1bQ8BUY9 377 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 TbcdQ8BYA0 1196 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Dcun1d2Q8BZJ7 259 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Fmo9Q8C116 539 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Fam221bQ8C627 487 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Fam149aQ8CFV2 787 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Spag16Q8K450 639 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Map3k21Q8VDG6 1002 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Mat2bQ99LB6 334 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 LiasQ99M04 373 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 MagohbQ9CQL1 146 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Golga1Q9CW79 758 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Tmem174Q9DCX7 243 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Pkp3Q9QY23 797 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 B9d1Q9R1S0 204 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 H2afb2S4R1M3 115 aa9.97□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Mroh7A2AVR2 1279 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Adam34A2RSG8 714 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Slc2a7P0C6A1 513 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Nt5eQ61503 576 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Ptk7Q8BKG3 1062 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Rmdn2Q8BSE0 410 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Gpr21Q8BX79 349 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Efcab8Q8C9R9 203 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Fcho1Q8K285 873 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Adi1Q99JT9 179 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 4930524N10RikQ9D519 233 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Maged2Q9ER67 616 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Slc29a1Q9JIM1 460 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Herpud2Q9JJC9 404 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Thap11Q9JJD0 305 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Dbn1Q9QXS6 706 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Cacna1bO55017 2327 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Gm29554A0A087WNW4 188 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Kcnk16G5E845 292 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Mcpt2P15119 244 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Akt1P31750 480 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Ptger4P32240 513 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Sox1P53783 391 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 LchnQ3UHG7 455 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 PnocQ64387 187 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Trappc6aQ78XR0 159 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Haus3Q8QZX2 570 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Smyd2Q8R5A0 433 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 HaghlQ9DB32 283 aa9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Stap1Q9JM90 297 aaKnown RBP9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 Eif4hQ9WUK2 248 aaKnown RBP9.96□□□□□ -0.81
Ccdc38-201ENSMUST00000092215 AspmQ8CJ27 3122 aa9.96□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms