RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Lgr5Q9Z1P4 907 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Slfn9B1ARD6 910 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Vmn2r67K7N6T2 851 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Gm8906L7N2A2 181 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 KlO35082 1014 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Nr5a2P45448 560 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Kcnj6P48542 425 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Zyg11bQ3UFS0 744 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 NkaplQ5SZT7 395 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Lcp2Q60787 533 aaKnown RBP9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 MogQ61885 246 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Pabpc5Q8C7D3 381 aaKnown RBP9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Chrna3Q8R4G9 499 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 TmlheQ91ZE0 421 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Nck1Q99M51 377 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Snx7Q9CY18 387 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Dcp2Q9CYC6 422 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 B4galt5Q9JMK0 388 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Cntnap4Q99P47 1310 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ssxb6A2BI74 170 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Zw10O54692 779 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Cyp2b9P12790 491 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Atp6v0d1P51863 351 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Coq10bQ3THF9 240 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Gpsm3Q3U1Z5 159 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 HrQ61645 1182 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Nr2e1Q64104 385 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Mvb12bQ6KAU4 317 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 NkrfQ8BY02 690 aaKnown RBP9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Cybrd1Q925G2 290 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 PompQ9CQT5 141 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ncam1P13595 1115 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Bmp1P98063 991 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Zdhhc15Q8BGJ0 337 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Sppl3Q9CUS9 384 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ift27Q9D0P8 186 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Acbd7Q9D258 88 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 VapbQ9QY76 243 aaKnown RBP9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 0610012G03RikA0A0J9YTR2 95 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Pramef17A2ASJ1 475 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Cyp2a22B2RXZ2 492 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Gm8180E9PXN0 145 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Stra6O70491 670 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Fam129aQ3UW53 926 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 ChpfQ6IQX7 774 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ptk7Q8BKG3 1062 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Gjd4Q8BSD4 364 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Zfp57Q8C6P8 421 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Colec12Q8K4Q8 742 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Klhl25Q8R2P1 589 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Sh3glb1Q9JK48 365 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ulk2Q9QY01 1037 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 AadatQ9WVM8 425 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Xlr5aA2BI45 236 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Zfp563B8JJZ9 448 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Vmn2r125D3Z3M1 369 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Vmn2r72D3Z4N8 856 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Zscan4bE9Q3G0 505 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Zfp28P10078 825 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Klrb1aP27811 227 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Rab23P35288 237 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 MafP54843 370 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 H2-M3Q31093 336 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Gm29609Q3UU56 907 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Thnsl2Q80W22 483 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Zdhhc19Q810M5 347 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Gtf3c2Q8BL74 907 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Asb14Q8C6Y6 587 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Mettl21eQ8CDZ2 244 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Cyp2d26Q8CIM7 500 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Saysd1Q8K190 188 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ears2Q9CXJ1 523 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Efcab9Q9DAM2 216 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 HaghlQ9DB32 283 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Nacc2Q9DCM7 586 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 RhojQ9ER71 214 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 CtsmQ9JL96 333 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Sae1Q9R1T2 350 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Abca14E9Q8F8 1683 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Pramef6A2A8M8 474 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Fam166bA2AIP0 273 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Olfr1200A2ATJ4 336 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Zfp105G3X9I0 524 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ebf3O08791 596 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 CtskP55097 329 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Nudt2P56380 147 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Tas2r16P59529 299 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Pik3r6Q3U6Q4 756 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Olfr867Q7TRF3 331 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Sephs1Q8BH69 392 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Pnpla8Q8K1N1 776 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Fmo2Q8K2I3 535 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ddx52Q8K301 598 aaKnown RBP9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Mfsd5Q921Y4 450 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Chst12Q99LL3 419 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 MecrQ9DCS3 373 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ifnar2O35664 513 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Siah1aP61092 282 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Polr2lP62876 67 aa9.38□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Q3TYS2 187 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms