RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Tfap2bQ61313 459 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Vmn2r26Q6TAC4 855 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Epb41l5Q8BGS1 731 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Klhl26Q8BGY4 606 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Exd1Q8CDF7 570 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Olfr1467Q8VFW1 308 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ppp1r16aQ923M0 524 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 DhddsQ99KU1 333 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Syde1Q9DBZ9 737 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Map3k6Q9WTR2 1291 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 VarsQ9Z1Q9 1263 aaKnown RBP9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ccdc88cQ6VGS5 2009 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Gm5072A2AHM1 344 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Gm45837F7D3W5 961 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Vmn2r4K7N784 913 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ercc2O08811 760 aaKnown RBP9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ptpn9O35239 593 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 LynP25911 512 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 NrlP54846 237 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cdh6P97326 790 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Pou1f1Q00286 291 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Aldh1a2Q62148 518 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 RhocQ62159 193 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Fcrl5Q68SN8 596 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Nudcd1Q6PIP5 582 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Zdhhc19Q810M5 347 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Guf1Q8C3X4 651 aaKnown RBP9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 ZwilchQ8R060 589 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Olfr1499Q8VG65 314 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 St7Q99M96 577 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Tpgs1Q99MS8 303 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Npm3Q9CPP0 175 aaKnown RBP9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Pard3bQ9CSB4 1203 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ints11Q9CWS4 600 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 2610042L04RikQ9D073 150 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cyp2c55Q9D816 490 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Il22Q9JJY9 179 aa9.96□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Gm28897A0A087WP44 222 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cyp2b13A6H6J2 491 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 4930579F01RikE9Q3L6 325 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Adgrf2E9Q4J9 644 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Gbx2P48031 348 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Tbx1P70323 479 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Has1Q61647 583 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cep78Q6IRU7 790 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Klhl5Q6PFE1 708 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 1700001J03RikQ80ZR8 219 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Pyhin1Q8BV49 420 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 AgpsQ8C0I1 645 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Slitrk6Q8C110 840 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Panx3Q8CEG0 392 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Pnpla8Q8K1N1 776 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ndufs2Q91WD5 463 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cndp2Q9D1A2 475 aaKnown RBP9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cldn22Q9D7U6 220 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Eif4e3Q9DBB5 207 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Dpysl5Q9EQF6 564 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ulk2Q9QY01 1037 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Dnaja2Q9QYJ0 412 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Tle6Q9WVB3 581 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Creb3l1Q9Z125 519 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Vmn2r27D3YUK6 857 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Map2k3O09110 347 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Alox5P48999 674 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Znf367Q0VDT2 340 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Adam2Q60718 735 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Abhd10Q6PE15 297 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Fndc11Q80WB0 326 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Cpsf4Q8BQZ5 211 aaKnown RBP9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Slc18a2Q8BRU6 517 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Kctd2Q8CEZ0 266 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Prmt5Q8CIG8 637 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Pacsin3Q99JB8 424 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Spesp1Q9D5A0 399 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Pak1ip1Q9DCE5 382 aaKnown RBP9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Capn10Q9ESK3 666 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Habp4Q9JKS5 411 aaKnown RBP9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Lrp5Q91VN0 1614 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ms4a4aA0A087WRT7 236 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 F6Y6L6 278 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ebf3O08791 596 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Lire1P11260 357 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Icam1P13597 537 aaKnown RBP9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Dsc2P55292 902 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Lrrn4P59383 733 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Vps45P97390 570 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Tarbp2P97473 365 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Pdlim7Q3TJD7 457 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Clec12aQ504P2 267 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Psd2Q6P1I6 770 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Tecpr1Q80VP0 1166 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 LnpepQ8C129 1025 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 AA792892Q8C6S1 278 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Mettl21eQ8CDZ2 244 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Sult5a1Q91X36 291 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Map4k3Q99JP0 894 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ifi44lQ9BDB7 447 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Ndufb5Q9CQH3 189 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Gemin6Q9CX53 166 aa9.95□□□□□ -0.82
Ldlr-201ENSMUST00000034713 Tmed11Q9D2R4 215 aa9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms