RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 FAM157BP0CG42 384 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 TIMP2P16035 220 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 TNFSF4P23510 183 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 PEX2P28328 305 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 SERPINB6P35237 376 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 VIPR2P41587 438 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 PIK3CBP42338 1070 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 MECP2P51608 486 aaKnown RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 COPAP53621 1224 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 TUBB4BP68371 445 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 MRPS25P82663 173 aaKnown RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 GALNT2Q10471 571 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 XRCC4Q13426 336 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 AFMIDQ63HM1 303 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 C8orf74Q6P047 294 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 BZW1Q7L1Q6 419 aaKnown RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 ZC3H18Q86VM9 953 aaKnown RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 ARHGAP12Q8IWW6 846 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 UMODL1-AS1Q8N2C9 162 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 MIER2Q8N344 545 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 CCDC33Q8N5R6 958 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 LZTR1Q8N653 840 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 TDRD5Q8NAT2 981 aaKnown RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 FAM13CQ8NE31 585 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 SUSD6Q92537 303 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 SLCO2A1Q92959 643 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 P2RY11Q96G91 374 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 RUNDC3BQ96NL0 473 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 NECTIN4Q96NY8 510 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 MYADMQ96S97 322 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 SLX1AQ9BQ83 275 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 FAM167BQ9BTA0 163 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 LRRC1Q9BTT6 524 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 NOL6Q9H6R4 1146 aaKnown RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 DONSONQ9NYP3 566 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 TBC1D14Q9P2M4 693 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 CD207Q9UJ71 328 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 ZNF148Q9UQR1 794 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 USP15Q9Y4E8 981 aaPredicted RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 RAD54BQ9Y620 910 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 SHROOM3Q8TF72 1996 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 A0A1B0GVM2 712 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 TCAF2A6NFQ2 919 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 H7C0C1 242 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 RAD51CO43502 376 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 PLOD3O60568 738 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 CLDN11O75508 207 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 CLEC3AO75596 197 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 FCARP24071 287 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 OR1E1P30953 314 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 HOXC12P31275 282 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 ATP5OP48047 213 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 MAPKAPK2P49137 400 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 NDST2P52849 883 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 CDH4P55283 916 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 DR1Q01658 176 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 TMED1Q13445 227 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 DHX34Q14147 1143 aaKnown RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 PDK1Q15118 436 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 SLC45A4Q5BKX6 768 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 HABP4Q5JVS0 413 aaKnown RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 MPP7Q5T2T1 576 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 GTF2IRD2BQ6EKJ0 949 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 USP53Q70EK8 1073 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 CHST9Q7L1S5 443 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 GTF2IRD2Q86UP8 949 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 CCDC105Q8IYK2 499 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 DEFB123Q8N688 67 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 HJURPQ8NCD3 748 aaPredicted RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 CCDC26Q8TAB7 109 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 ATP6V1E2Q96A05 226 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 OTUB2Q96DC9 234 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 TMA16Q96EY4 203 aaKnown RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 CELF6Q96J87 481 aaKnown RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 QKIQ96PU8 341 aaKnown RBP eCLIP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 TMEM121Q9BTD3 319 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 UBE2ZQ9H832 354 aaPredicted RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 C10orf88Q9H8K7 445 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 DMRT3Q9NQL9 472 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 MKL2Q9ULH7 1088 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 DRG1Q9Y295 367 aaKnown RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 TMEM98Q9Y2Y6 226 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 COQ6Q9Y2Z9 468 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 RRP15Q9Y3B9 282 aaKnown RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 WNT6Q9Y6F9 365 aa8.1□□□□□ -1.11
SCARB2-220ENST00000640076 V9GYY5 206 aaPredicted RBP8.1□□□□□ -1.11
SCARB2-220ENST00000640076 NYNRINQ9P2P1 1898 aaKnown RBP8.09□□□□□ -1.11
SCARB2-220ENST00000640076 KIF26AQ9ULI4 1882 aaPredicted RBP8.09□□□□□ -1.11
SCARB2-220ENST00000640076 HEPACAM2A8MVW5 462 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 SLC9A3R1O14745 358 aaPredicted RBP8.09□□□□□ -1.11
SCARB2-220ENST00000640076 TTI1O43156 1089 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 CTIFO43310 598 aaKnown RBP8.09□□□□□ -1.11
SCARB2-220ENST00000640076 TBL1XO60907 577 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 SMNDC1O75940 238 aaKnown RBP eCLIP8.09□□□□□ -1.11
SCARB2-220ENST00000640076 KCNH1O95259 989 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 SCG5P05408 212 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 CCDC159P0C7I6 412 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 LAMP2P13473 410 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 FOSL2P15408 326 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 MX2P20592 715 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms