RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 HTRA2O43464 458 aaPredicted RBP13.87□□□□□ -0.19
PNKP-228ENST00000637325 MTA2O94776 668 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 CYP2A6P11509 494 aaPredicted RBP13.87□□□□□ -0.19
PNKP-228ENST00000637325 KRT10P13645 584 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 JUPP14923 745 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 CR2P20023 1033 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 ACP1P24666 158 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 CCNCP24863 283 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 HTR1BP28222 390 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 HNF1BP35680 557 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 SLC1A1P43005 524 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 MAGEA1P43355 309 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 PEX5P50542 639 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 PPARDQ03181 441 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 EIF2B5Q13144 721 aaKnown RBP13.87□□□□□ -0.19
PNKP-228ENST00000637325 INPP5AQ14642 412 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 ACOX1Q15067 660 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 SMAD1Q15797 465 aaKnown RBP13.87□□□□□ -0.19
PNKP-228ENST00000637325 LIPIQ6XZB0 460 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 MACC1Q6ZN28 852 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 PHACTR4Q8IZ21 702 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 NDUFAF2Q8N183 169 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 TEX26Q8N6G2 289 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 TC2NQ8N9U0 490 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 CCNYQ8ND76 341 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 ZNF548Q8NEK5 533 aaPredicted RBP13.87□□□□□ -0.19
PNKP-228ENST00000637325 ATL2Q8NHH9 583 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 FAF2Q96CS3 445 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 NSMCE3Q96MG7 304 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 RNF157Q96PX1 679 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 IL12RB2Q99665 862 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 SEMA3CQ99985 751 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 APOOQ9BUR5 198 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 POLR1EQ9GZS1 481 aaKnown RBP13.87□□□□□ -0.19
PNKP-228ENST00000637325 RBM22Q9NW64 420 aaKnown RBP eCLIP13.87□□□□□ -0.197e-6■■■□□ 17.4
PNKP-228ENST00000637325 B4GALT6Q9UBX8 382 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 APOBEC3BQ9UH17 382 aaKnown RBP13.87□□□□□ -0.19
PNKP-228ENST00000637325 KLF15Q9UIH9 416 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 ZMIZ1Q9ULJ6 1067 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 PHTF1Q9UMS5 762 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 CSNK1G3Q9Y6M4 447 aa13.87□□□□□ -0.19
PNKP-228ENST00000637325 ZFC3H1O60293 1989 aaKnown RBP13.86□□□□□ -0.19
PNKP-228ENST00000637325 K7ESM1 405 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 SPOPO43791 374 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 RECQL5O94762 991 aaPredicted RBP13.86□□□□□ -0.19
PNKP-228ENST00000637325 KRT1P04264 644 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 CES1P23141 567 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 VIPR1P32241 457 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 BLKP51451 505 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 DUSP3P51452 185 aaPredicted RBP13.86□□□□□ -0.19
PNKP-228ENST00000637325 E2F1Q01094 437 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 GBE1Q04446 702 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 TRAF2Q12933 501 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 RALGDSQ12967 914 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 NFATC4Q14934 902 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 AGERQ15109 404 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 SPA17Q15506 151 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 PRRT3Q5FWE3 981 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 ARMC12Q5T9G4 340 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 DENND2CQ68D51 928 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 ENPP7Q6UWV6 458 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 MARCH9Q86YJ5 346 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 RBFAQ8N0V3 343 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.86□□□□□ -0.19
PNKP-228ENST00000637325 PQLC3Q8N755 202 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 APOLD1Q96LR9 279 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 TSGA13Q96PP4 275 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 RBSNQ9H1K0 784 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 LUC7LQ9NQ29 371 aaKnown RBP13.86□□□□□ -0.19
PNKP-228ENST00000637325 DDX56Q9NY93 547 aaKnown RBP13.86□□□□□ -0.19
PNKP-228ENST00000637325 DOLKQ9UPQ8 538 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 RAI2Q9Y5P3 530 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 APC2O95996 2303 aa13.86□□□□□ -0.19
PNKP-228ENST00000637325 KMT2BQ9UMN6 2715 aaPredicted RBP13.85□□□□□ -0.19
PNKP-228ENST00000637325 CACNB4O00305 520 aaPredicted RBP13.85□□□□□ -0.19
PNKP-228ENST00000637325 APOL1O14791 398 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 RASGRP1O95267 797 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 PGLSO95336 258 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 ANXA6P08133 673 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 GIMD1P0DJR0 217 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 CKMT1AP12532 417 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 CTSEP14091 401 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 CCNB1P14635 433 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 ZFXP17010 805 aaPredicted RBP13.85□□□□□ -0.19
PNKP-228ENST00000637325 COMTP21964 271 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 CYLC1P35663 651 aaPredicted RBP13.85□□□□□ -0.19
PNKP-228ENST00000637325 ZNF75DP51815 510 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 EPHB1P54762 984 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 MTM1Q13496 603 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 C1orf61Q13536 156 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 ARHGEF7Q14155 803 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 DEFB133Q30KQ1 61 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 HES3Q5TGS1 186 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 ZCCHC8Q6NZY4 707 aaKnown RBP13.85□□□□□ -0.19
PNKP-228ENST00000637325 USP45Q70EL2 814 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 RD3Q7Z3Z2 195 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 RFX6Q8HWS3 928 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 HID1Q8IV36 788 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 RHOT1Q8IXI2 618 aa13.85□□□□□ -0.19
PNKP-228ENST00000637325 CCDC13Q8IYE1 715 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms