RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 PRKAA1Q13131 559 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 TRIP4Q15650 581 aaPredicted RBP18.96■□□□□ 0.63
CLN5-216ENST00000636780 TECRLQ5HYJ1 363 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 MSANTD2Q6P1R3 559 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 ACTRT2Q8TDY3 377 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 SREK1Q8WXA9 508 aaKnown RBP18.96■□□□□ 0.63
CLN5-216ENST00000636780 IFT43Q96FT9 208 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 KCNA7Q96RP8 456 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 EBF3Q9H4W6 596 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 CCDC167Q9P0B6 97 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 SRRDQ9UH36 339 aa18.96■□□□□ 0.63
CLN5-216ENST00000636780 NCF1BA6NI72 391 aaPredicted RBP18.95■□□□□ 0.62
CLN5-216ENST00000636780 NCF1CA8MVU1 366 aaPredicted RBP18.95■□□□□ 0.62
CLN5-216ENST00000636780 SDHDO14521 159 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 NCF1P14598 390 aaPredicted RBP18.95■□□□□ 0.62
CLN5-216ENST00000636780 CST5P28325 142 aaPredicted RBP18.95■□□□□ 0.62
CLN5-216ENST00000636780 AP2B1P63010 937 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 ZNF235Q14590 738 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 TBCCQ15814 346 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 FBXW8Q8N3Y1 598 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 DCBLD1Q8N8Z6 715 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 AUTS2Q8WXX7 1259 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 C3orf30Q96M34 536 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 SLC39A3Q9BRY0 314 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 TRIM8Q9BZR9 551 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 ATP13A1Q9HD20 1204 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.95■□□□□ 0.62
CLN5-216ENST00000636780 IKZF3Q9UKT9 509 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 GREB1Q4ZG55 1949 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 H3BMM5 538 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 SOX11P35716 441 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 NDST2P52849 883 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 ECT2LQ008S8 904 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 PITRM1Q5JRX3 1037 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 HMGCLL1Q8TB92 370 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 MRPL57Q9BQC6 102 aaKnown RBP18.95■□□□□ 0.62
CLN5-216ENST00000636780 SIKE1Q9BRV8 207 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 RNF38Q9H0F5 515 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 STN1Q9H668 368 aaKnown RBP18.95■□□□□ 0.62
CLN5-216ENST00000636780 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.95■□□□□ 0.62
CLN5-216ENST00000636780 SORCS3Q9UPU3 1222 aa18.95■□□□□ 0.62
CLN5-216ENST00000636780 DOCK4Q8N1I0 1966 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 MIA3Q5JRA6 1907 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 F8W8V4 182 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 CBX4O00257 560 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 GALTP07902 379 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 LINGO3P0C6S8 592 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 SPATA31D3P0C874 917 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 CRABP2P29373 138 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 FOXA1P55317 472 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 MRPS22P82650 360 aaKnown RBP18.94■□□□□ 0.62
CLN5-216ENST00000636780 CEACAM7Q14002 265 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 CYLC2Q14093 348 aaPredicted RBP18.94■□□□□ 0.62
CLN5-216ENST00000636780 MRPL58Q14197 206 aaKnown RBP18.94■□□□□ 0.62
CLN5-216ENST00000636780 FSCBQ5H9T9 825 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 SPATA31D4Q6ZUB0 917 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 PPFIBP2Q8ND30 876 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 FUBP3Q96I24 572 aaKnown RBP eCLIP18.94■□□□□ 0.62
CLN5-216ENST00000636780 ZNF184Q99676 751 aaPredicted RBP18.94■□□□□ 0.62
CLN5-216ENST00000636780 TMEM161AQ9NX61 479 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 NSMCE4AQ9NXX6 385 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 LRFN2Q9ULH4 789 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 C2orf78A6NCI8 922 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 UBXN8O00124 270 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 ACADSP16219 412 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 PEX19P40855 299 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 LEPRP48357 1165 aaKnown RBP18.94■□□□□ 0.62
CLN5-216ENST00000636780 YBX1P67809 324 aaKnown RBP18.94■□□□□ 0.62
CLN5-216ENST00000636780 NKX3-2P78367 333 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 POU4F1Q01851 419 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 CDC16Q13042 620 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 RNF220Q5VTB9 566 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 ACAD11Q709F0 780 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 ISCA2Q86U28 154 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 RMDN1Q96DB5 314 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 CCDC97Q96F63 343 aaPredicted RBP18.94■□□□□ 0.62
CLN5-216ENST00000636780 YIPF3Q9GZM5 350 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 CLIC5Q9NZA1 410 aa18.94■□□□□ 0.62
CLN5-216ENST00000636780 IGLV3-10A0A075B6K4 115 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 MROH6A6NGR9 719 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 SLC38A8A6NNN8 435 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 WASH4PA8MWX3 477 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 SEC24AO95486 1093 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 FMO4P31512 558 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 FAM83EQ2M2I3 478 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.93■□□□□ 0.62
CLN5-216ENST00000636780 CUZD1Q86UP6 607 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 OR6K2Q8NGY2 324 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.93■□□□□ 0.62
CLN5-216ENST00000636780 RGSL1A5PLK6 1076 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 CCNT2O60583 730 aaKnown RBP18.93■□□□□ 0.62
CLN5-216ENST00000636780 SNAP91O60641 907 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 CAPN15O75808 1086 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 LTA4HP09960 611 aaKnown RBP18.93■□□□□ 0.62
CLN5-216ENST00000636780 SLC2A3P11169 496 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 ATP5F1P24539 256 aaPredicted RBP18.93■□□□□ 0.62
CLN5-216ENST00000636780 AQP4P55087 323 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 SEMG2Q02383 582 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 OR4D1Q15615 310 aa18.93■□□□□ 0.62
CLN5-216ENST00000636780 EFHBQ8N7U6 833 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms