RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TPH1P17752 444 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 TNK2Q07912 1038 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ATP1A4Q13733 1029 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 KCNA10Q16322 511 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 GXYLT1Q4G148 440 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 N4BP2L1Q5TBK1 243 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 FRRS1Q6ZNA5 592 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 VASH1Q7L8A9 365 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 CHST4Q8NCG5 386 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 FAM13CQ8NE31 585 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SRFBP1Q8NEF9 429 aaKnown RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 GPR156Q8NFN8 814 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 C1orf216Q8TAB5 229 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 DNASE1L2Q92874 299 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 NKD1Q969G9 470 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 TIFAQ96CG3 184 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ANKRD27Q96NW4 1050 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 TBCBQ99426 244 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ASB7Q9H672 318 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SMURF1Q9HCE7 757 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 GPATCH2LQ9NWQ4 482 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ARHGEF33A8MVX0 844 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 F8VZ95 297 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 KCNQ2O43526 872 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 GZMAP12544 262 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 CD86P42081 329 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 GDI2P50395 445 aaKnown RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 FOXM1Q08050 763 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 RIPK1Q13546 671 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ZNF268Q14587 947 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 C9orf64Q5T6V5 341 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 BROXQ5VW32 411 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 BICRALQ6AI39 1079 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SULT1C3Q6IMI6 304 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 DUS1LQ6P1R4 473 aaKnown RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 TXNDC11Q6PKC3 985 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 THAP5Q7Z6K1 395 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 DNAAF1Q8NEP3 725 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 CCDC115Q96NT0 180 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 MMADHCQ9H3L0 296 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 CDHR5Q9HBB8 845 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 PCDH9Q9HC56 1237 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 NEDD8-MDP1E9PL57 170 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 TRDMT1O14717 391 aaKnown RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ZBTB22O15209 634 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 PER1O15534 1290 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 PCCBP05166 539 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 HGFP14210 728 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ZNF823P16415 610 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ECHS1P30084 290 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 CACNA2D1P54289 1103 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ERVK-24P63145 666 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SLC15A2Q16348 729 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SLC25A25Q6KCM7 469 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 TTI2Q6NXR4 508 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 DEF8Q6ZN54 512 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SYVN1Q86TM6 617 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 MTDHQ86UE4 582 aaKnown RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SLC47A2Q86VL8 602 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 GALNT13Q8IUC8 556 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 REM2Q8IYK8 340 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 DNAJA4Q8WW22 397 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 PPCDCQ96CD2 204 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 EXOC2Q96KP1 924 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SLC25A23Q9BV35 468 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 PLGRKTQ9HBL7 147 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 GMPPBQ9Y5P6 360 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 MAGI2Q86UL8 1455 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 FAM234BA2RU67 622 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ATG13O75143 517 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ERCC1P07992 297 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 MAPTP10636 758 aaKnown RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 DBTP11182 482 aaKnown RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 PTPN5P54829 565 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 MCCD1P59942 119 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SMARCB1Q12824 385 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 PTPRNQ16849 979 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 TCHHL1Q5QJ38 904 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 CCNI2Q6ZMN8 369 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 PTCHD4Q6ZW05 846 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 DGLUCYQ7Z3D6 616 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 CROCCP3Q8IVE0 287 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SCUBE3Q8IX30 993 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 B3GALT6Q96L58 329 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 PLA2G12BQ9BX93 195 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ACTL7BQ9Y614 415 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 CPS1P31327 1500 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ARL5CA6NH57 179 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 TNFRSF10BO14763 440 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SNAP91O60641 907 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 MT-CO1P00395 513 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 OTCP00480 354 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 HOXB6P17509 224 aaKnown RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 CDH3P22223 829 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 DDX6P26196 483 aaKnown RBP eCLIP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SSR2P43308 183 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 MRPS6P82932 125 aaKnown RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ELP6Q0PNE2 266 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 TAF5Q15542 800 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms