RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 HSFY1Q96LI6 401 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 GLT1D1Q96MS3 346 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 FOPNLQ96NB1 174 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 C8orf37Q96NL8 207 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 SLC4A9Q96Q91 983 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 PHOX2BQ99453 314 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 PAFAH2Q99487 392 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 RIT2Q99578 217 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 PKP2Q99959 881 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 DPYSL5Q9BPU6 564 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 PELOQ9BRX2 385 aaKnown RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 TTYH2Q9BSA4 534 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 RTKNQ9BST9 563 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 MTG1Q9BT17 334 aaPredicted RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 DHRS4Q9BTZ2 278 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 CCDC32Q9BV29 185 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 ADI1Q9BV57 179 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 SPATA9Q9BWV2 254 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 GTPBP2Q9BX10 602 aaKnown RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 ANO3Q9BYT9 981 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 UCK2Q9BZX2 261 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 TINAGL1Q9GZM7 467 aaPredicted RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 DDX24Q9GZR7 859 aaKnown RBP eCLIP1.93□□□□□ -2.11e-6■■■■□ 20.5
TCF4-264ENST00000628391 POLR1EQ9GZS1 481 aaKnown RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 WNT5BQ9H1J7 359 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 SPNS1Q9H2V7 528 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 ADAMTS10Q9H324 1103 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 DSN1Q9H410 356 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 ACSS3Q9H6R3 686 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 LDAHQ9H6V9 325 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 COG4Q9H9E3 785 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 DBNDD1Q9H9R9 158 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 NMUR1Q9HB89 426 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 LY9Q9HBG7 655 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 ZFP14Q9HCL3 533 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 CABP5Q9NP86 173 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 CABP2Q9NPB3 220 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 BRD7Q9NPI1 651 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 HPS4Q9NQG7 708 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 NECTIN3Q9NQS3 549 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 STARD7Q9NQZ5 370 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 POLE4Q9NR33 117 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 KLHL1Q9NR64 748 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 PCDHB16Q9NRJ7 776 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 PLSCR3Q9NRY6 295 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 RGS18Q9NS28 235 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 KCNH7Q9NS40 1196 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 BMP2KQ9NSY1 1161 aaPredicted RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 TBC1D22BQ9NU19 505 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 SETD4Q9NVD3 440 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 HPF1Q9NWY4 346 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 DUS2Q9NX74 493 aaKnown RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 CMTM6Q9NX76 183 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 COA4Q9NYJ1 87 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 ACTR10Q9NZ32 417 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 COQ3Q9NZJ6 369 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 ZNF224Q9NZL3 707 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 CAMSAP3Q9P1Y5 1249 aaPredicted RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 NYAP2Q9P242 653 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 ABCD2Q9UBJ2 740 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 TJP2Q9UDY2 1190 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 FAM198AQ9UFP1 575 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 SRP68Q9UHB9 627 aaKnown RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 ADAMTS1Q9UHI8 967 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 GPN3Q9UHW5 284 aaPredicted RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 EVLQ9UI08 416 aaPredicted RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 MAD2L2Q9UI95 211 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 TSR3Q9UJK0 312 aaKnown RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 KLHL21Q9UJP4 597 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 GGA1Q9UJY5 639 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 VAV3Q9UKW4 847 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 CNOT6Q9ULM6 557 aaKnown RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 CLEC4AQ9UMR7 237 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 PCDHGC3Q9UN70 934 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 PLCL2Q9UPR0 1127 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 ZFR2Q9UPR6 939 aaKnown RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 SHOC2Q9UQ13 582 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 BAIAP2Q9UQB8 552 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 LIPT1Q9Y234 373 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 RPH3AQ9Y2J0 694 aaPredicted RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 SLC27A5Q9Y2P5 690 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.93□□□□□ -2.1
TCF4-264ENST00000628391 MED16Q9Y2X0 877 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 TMX2Q9Y320 296 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 NDUFAF1Q9Y375 327 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 NR2E1Q9Y466 385 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 TCAF1Q9Y4C2 921 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 FARP1Q9Y4F1 1045 aaPredicted RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 PCDHGA2Q9Y5H1 932 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 PCDHAC2Q9Y5I4 1007 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 COL4A3BPQ9Y5P4 624 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 PSAT1Q9Y617 370 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 COPG1Q9Y678 874 aaKnown RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 PTCH2Q9Y6C5 1203 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 A3GALT2U3KPV4 340 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 PMF1-BGLAPU3KQ54 211 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 FPGT-TNNI3KV9GXZ4 949 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 DDX60LQ5H9U9 1706 aaKnown RBP1.93□□□□□ -2.1
TCF4-264ENST00000628391 PLIN4Q96Q06 1357 aa1.93□□□□□ -2.1
TCF4-264ENST00000628391 TMEM2Q9UHN6 1383 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms