RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 PPP1R3DO95685 299 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 HEXAP06865 529 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 ETFAP13804 333 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 COX7A2P14406 83 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 SSTR2P30874 369 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 COMPP49747 757 aaPredicted RBP3.39□□□□□ -1.87
VBP1-204ENST00000625964 PEX5P50542 639 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 GRIK3Q13003 919 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 MMEL1Q495T6 779 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.39□□□□□ -1.876e-11■■■■■ 38.7
VBP1-204ENST00000625964 ARMC9Q7Z3E5 817 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 ZC3HC1Q86WB0 502 aaKnown RBP3.39□□□□□ -1.87
VBP1-204ENST00000625964 HEATR4Q86WZ0 1026 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 PGBD5Q8N414 524 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 FBXL8Q96CD0 374 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 RNF125Q96EQ8 232 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 KLHL15Q96M94 604 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 IL25Q9H293 177 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 BPIFA1Q9NP55 256 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 SLC9A2Q9UBY0 812 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 MALT1Q9UDY8 824 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 ARHGAP26Q9UNA1 814 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 CDC14AQ9UNH5 594 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 NFS1Q9Y697 457 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 ARID4BQ4LE39 1312 aaPredicted RBP3.39□□□□□ -1.87
VBP1-204ENST00000625964 IGLV5-37A0A075B6J1 123 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 DENND3A2RUS2 1198 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 IRF1P10914 325 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 DAOP14920 347 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 CD58P19256 250 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 ITGAXP20702 1163 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 CHATP28329 748 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 COASYQ13057 564 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 NEDD9Q14511 834 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 CALCRLQ16602 461 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 HIST2H2ACQ16777 129 aaPredicted RBP3.39□□□□□ -1.87
VBP1-204ENST00000625964 TCTN1Q2MV58 587 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 FAM69AQ5T7M9 428 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 RHBDF2Q6PJF5 856 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 CPLX2Q6PUV4 134 aaKnown RBP3.39□□□□□ -1.87
VBP1-204ENST00000625964 DHX40Q8IX18 779 aaKnown RBP3.39□□□□□ -1.87
VBP1-204ENST00000625964 ZCCHC9Q8N567 271 aaKnown RBP3.39□□□□□ -1.87
VBP1-204ENST00000625964 SCCPDHQ8NBX0 429 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 LILRB1Q8NHL6 650 aaPredicted RBP3.39□□□□□ -1.87
VBP1-204ENST00000625964 PPM1EQ8WY54 764 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 SNAPC3Q92966 411 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 KLHL29Q96CT2 875 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 ZNF570Q96NI8 536 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 OR1F2PQ96R84 312 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 C1QTNF4Q9BXJ3 329 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 ZNF556Q9HAH1 456 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 NOX4Q9NPH5 578 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 WASH6PQ9NQA3 447 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 PPP1R14DQ9NXH3 145 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 SNX9Q9Y5X1 595 aa3.39□□□□□ -1.87
VBP1-204ENST00000625964 SRRM3A6NNA2 597 aaPredicted RBP3.38□□□□□ -1.87
VBP1-204ENST00000625964 SMTNL1A8MU46 457 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 NPIPB11E5RHQ5 1161 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 WNT9BO14905 357 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 NPHP1O15259 732 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 MT-CYBP00156 380 aaPredicted RBP3.38□□□□□ -1.87
VBP1-204ENST00000625964 AFPP02771 609 aaKnown RBP3.38□□□□□ -1.87
VBP1-204ENST00000625964 TFP02787 698 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 UMODP07911 640 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 IGHV4-30-4P0DP06 118 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 GPTP24298 496 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 NEXNQ0ZGT2 675 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 SNTA1Q13424 505 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 RNPS1Q15287 305 aaKnown RBP3.38□□□□□ -1.87
VBP1-204ENST00000625964 EFNB3Q15768 340 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 BAK1Q16611 211 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 KIF19Q2TAC6 998 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 SLC9B1Q4ZJI4 515 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 SLC9C2Q5TAH2 1124 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 FAM69BQ5VUD6 431 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 SPSB3Q6PJ21 355 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 LCTLQ6UWM7 567 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 ST8SIA4Q92187 359 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 IGSF21Q96ID5 467 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 CSF3RQ99062 836 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 SLC25A18Q9H1K4 315 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 RETREG1Q9H6L5 497 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 MYH16Q9H6N6 1097 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 MAGEE1Q9HCI5 957 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 DDX4Q9NQI0 724 aaKnown RBP3.38□□□□□ -1.87
VBP1-204ENST00000625964 KCND2Q9NZV8 630 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 MPP6Q9NZW5 540 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 SLC13A4Q9UKG4 626 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 GJD2Q9UKL4 321 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 SARDHQ9UL12 918 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 CRYL1Q9Y2S2 319 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 NFE2L3Q9Y4A8 694 aa3.38□□□□□ -1.87
VBP1-204ENST00000625964 LOC102724159A0A0B4J2E5 919 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 IFNL4K9M1U5 179 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 SNAP23O00161 211 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 MMP2P08253 660 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 AGAP20933 346 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 ABCD3P28288 659 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms