RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 LHX5Q9H2C1 402 aa21.82■■□□□ 1.08
PCSK6-220ENST00000622483 POMKQ9H5K3 350 aa21.82■■□□□ 1.08
PCSK6-220ENST00000622483 MSI1O43347 362 aaKnown RBP21.81■■□□□ 1.08
PCSK6-220ENST00000622483 PLA2G6O60733 806 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 BDNFP23560 247 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 TTKP33981 857 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 RPS9P46781 194 aaKnown RBP21.81■■□□□ 1.08
PCSK6-220ENST00000622483 CTBP1Q13363 440 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 HERC3Q15034 1050 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 ACAP2Q15057 778 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 PYCR3Q53H96 274 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 KCNMB4Q86W47 210 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 TBC1D13Q9NVG8 400 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.81■■□□□ 1.08
PCSK6-220ENST00000622483 TSPAN16Q9UKR8 245 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 STYXL1Q9Y6J8 313 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 NOTOA8MTQ0 251 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 ACOX3O15254 700 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 CXCL8P10145 99 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 CLPPQ16740 277 aaPredicted RBP21.81■■□□□ 1.08
PCSK6-220ENST00000622483 ATAD3BQ5T9A4 648 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 XAF1Q6GPH4 301 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 PMF1Q6P1K2 205 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 USP50Q70EL3 339 aaPredicted RBP21.81■■□□□ 1.08
PCSK6-220ENST00000622483 R3HCC1LQ7Z5L2 792 aaKnown RBP21.81■■□□□ 1.08
PCSK6-220ENST00000622483 CLEC14AQ86T13 490 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 MFSD2AQ8NA29 543 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 DNAJB14Q8TBM8 379 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 ALOXE3Q9BYJ1 711 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 AGPAT4Q9NRZ5 378 aa21.81■■□□□ 1.08
PCSK6-220ENST00000622483 CCM2LQ9NUG4 571 aaPredicted RBP21.81■■□□□ 1.08
PCSK6-220ENST00000622483 DDHD2O94830 711 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 ITGB3P05106 788 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 FSHRP23945 695 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 NEK2P51955 445 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 ARPC4P59998 168 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 TAS2R42Q7RTR8 314 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 ANKRD13BQ86YJ7 626 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 CSPG4P5Q96PW8 444 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 SPATC1LQ9H0A9 340 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 MORF4L1Q9UBU8 362 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 PNMA8BQ9ULN7 279 aaPredicted RBP21.8■■□□□ 1.08
PCSK6-220ENST00000622483 HTR1BP28222 390 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 TGFBR1P36897 503 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 ZNF846Q147U1 533 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 PPP2R2DQ66LE6 453 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 TXNDC5Q8NBS9 432 aaKnown RBP21.8■■□□□ 1.08
PCSK6-220ENST00000622483 ELMO1Q92556 727 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 KCTD15Q96SI1 283 aaPredicted RBP21.8■■□□□ 1.08
PCSK6-220ENST00000622483 UHRF1Q96T88 793 aaPredicted RBP21.8■■□□□ 1.08
PCSK6-220ENST00000622483 C9orf16Q9BUW7 83 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 GPSM3Q9Y4H4 160 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 ZFC3H1O60293 1989 aaKnown RBP21.8■■□□□ 1.08
PCSK6-220ENST00000622483 H0Y858 1186 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 MBL2P11226 248 aaPredicted RBP21.8■■□□□ 1.08
PCSK6-220ENST00000622483 KCNA5P22460 613 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 TPD52P55327 224 aaPredicted RBP21.8■■□□□ 1.08
PCSK6-220ENST00000622483 IFRD2Q12894 506 aaPredicted RBP21.8■■□□□ 1.08
PCSK6-220ENST00000622483 CAPSQ13938 189 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 FAM209AQ5JX71 171 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 NCBP2-AS2Q69YL0 99 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 DENND6AQ8IWF6 608 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 HOMEZQ8IX15 550 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 NDRG1Q92597 394 aaKnown RBP21.8■■□□□ 1.08
PCSK6-220ENST00000622483 TMEM176AQ96HP8 235 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 VRTNQ9H8Y1 702 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 HMG20AQ9NP66 347 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 CHST12Q9NRB3 414 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 SCHIP1Q9P0W5 487 aaPredicted RBP21.8■■□□□ 1.08
PCSK6-220ENST00000622483 TMEM181Q9P2C4 612 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 VANGL2Q9ULK5 521 aa21.8■■□□□ 1.08
PCSK6-220ENST00000622483 TNPO2O14787 897 aaKnown RBP21.79■■□□□ 1.08
PCSK6-220ENST00000622483 INMTO95050 263 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 HLCSP50747 726 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 COPZ1P61923 177 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 LY6KQ17RY6 165 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 TSTD2Q5T7W7 516 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 ANKRD34AQ69YU3 496 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 ZNF567Q8N184 647 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 NDNFQ8TB73 568 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 SPATA17Q96L03 361 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 QKIQ96PU8 341 aaKnown RBP eCLIP21.79■■□□□ 1.082e-6■■■■□ 25.1
PCSK6-220ENST00000622483 CGREF1Q99674 301 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 JPH1Q9HDC5 661 aaPredicted RBP21.79■■□□□ 1.08
PCSK6-220ENST00000622483 PRDM8Q9NQV8 689 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 KLHL8Q9P2G9 620 aaPredicted RBP21.79■■□□□ 1.08
PCSK6-220ENST00000622483 B4GALT5O43286 388 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 PSAPP07602 524 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 ENO2P09104 434 aaPredicted RBP21.79■■□□□ 1.08
PCSK6-220ENST00000622483 NMBRP28336 390 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 CCT8P50990 548 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 CEP97Q8IW35 865 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 CENPLQ8N0S6 344 aaPredicted RBP21.79■■□□□ 1.08
PCSK6-220ENST00000622483 NSUN6Q8TEA1 469 aaKnown RBP21.79■■□□□ 1.08
PCSK6-220ENST00000622483 RAB2BQ8WUD1 216 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 TDRD1Q9BXT4 1180 aaKnown RBP21.79■■□□□ 1.08
PCSK6-220ENST00000622483 SCUBE2Q9NQ36 999 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 RNF19AQ9NV58 838 aa21.79■■□□□ 1.08
PCSK6-220ENST00000622483 DOCK5Q9H7D0 1870 aa21.78■■□□□ 1.08
PCSK6-220ENST00000622483 LOXHD1Q8IVV2 1947 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms