RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 CNTFP26441 200 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 HPCAL1P37235 193 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 PRKCQQ04759 706 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 RNASE12Q5GAN4 147 aaKnown RBP12.54□□□□□ -0.4
SYNRG-229ENST00000621136 UGT3A1Q6NUS8 523 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 KCNMB4Q86W47 210 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 SLC41A1Q8IVJ1 513 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 OR9I1Q8NGQ6 314 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ACER1Q8TDN7 264 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ZNF486Q96H40 463 aaPredicted RBP12.54□□□□□ -0.4
SYNRG-229ENST00000621136 COG8Q96MW5 612 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 SLC29A1Q99808 456 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ZNF556Q9HAH1 456 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 SSU72Q9NP77 194 aaKnown RBP12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ZNF624Q9P2J8 865 aaPredicted RBP12.54□□□□□ -0.4
SYNRG-229ENST00000621136 PCDHGB4Q9UN71 923 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 RAP2CQ9Y3L5 183 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 PCDHGB5Q9Y5G0 923 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 CDK5RAP2Q96SN8 1893 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ISPDA4D126 451 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 CRHR1P34998 444 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 GCNT1Q02742 428 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 C1QBPQ07021 282 aaKnown RBP12.54□□□□□ -0.4
SYNRG-229ENST00000621136 TRAP1Q12931 704 aaKnown RBP12.54□□□□□ -0.4
SYNRG-229ENST00000621136 STK11Q15831 433 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 UGP2Q16851 508 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 FAM98CQ17RN3 349 aaKnown RBP12.54□□□□□ -0.4
SYNRG-229ENST00000621136 TBRG1Q3YBR2 411 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 CLEC6AQ6EIG7 209 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 NCSTNQ92542 709 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ZNF516Q92618 1163 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ABCG8Q9H221 673 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 RAVER2Q9HCJ3 691 aaKnown RBP12.54□□□□□ -0.4
SYNRG-229ENST00000621136 SLC35C2Q9NQQ7 365 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 VANGL2Q9ULK5 521 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 UGT2A1Q9Y4X1 527 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 PCDHGA7Q9Y5G6 932 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 CNTRLQ7Z7A1 2325 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 STRCP1A6NGW2 1772 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 CCDC154A6NI56 674 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ANGPTL1O95841 491 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 CCNE2O96020 404 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ZNF806P0C7X5 589 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ITGALP20701 1170 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 CCNA1P78396 465 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 CSTF3Q12996 717 aaKnown RBP12.54□□□□□ -0.4
SYNRG-229ENST00000621136 FAM131AQ6UXB0 335 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 Q6ZNX1 250 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 TMEM179Q6ZVK1 233 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 MMAAQ8IVH4 418 aaKnown RBP12.54□□□□□ -0.4
SYNRG-229ENST00000621136 LARGE2Q8N3Y3 721 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 DCBLD1Q8N8Z6 715 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 DTX3Q8N9I9 347 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 FNDC5Q8NAU1 212 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 RPL10LQ96L21 214 aaKnown RBP12.54□□□□□ -0.4
SYNRG-229ENST00000621136 QKIQ96PU8 341 aaKnown RBP eCLIP12.54□□□□□ -0.44e-6■■■■□ 22.7
SYNRG-229ENST00000621136 IDI2Q9BXS1 227 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 POLG2Q9UHN1 485 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 ZNRF3Q9ULT6 936 aa12.54□□□□□ -0.4
SYNRG-229ENST00000621136 DRG1Q9Y295 367 aaKnown RBP12.54□□□□□ -0.4
SYNRG-229ENST00000621136 C2P06681 752 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 AOC1P19801 751 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 CAPGP40121 348 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 ZNF252P-AS1Q0IIN9 211 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 DLGAP5Q15398 846 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 FIBCD1Q8N539 461 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 TPD52L3Q96J77 140 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 PPM1MQ96MI6 270 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 ZNF696Q9H7X3 374 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 ERGIC3Q9Y282 383 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 SLC30A1Q9Y6M5 507 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 CROCCQ5TZA2 2017 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 TRDMT1O14717 391 aaKnown RBP12.53□□□□□ -0.4
SYNRG-229ENST00000621136 KATNA1O75449 491 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 APOA4P06727 396 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 DHRS4L1P0CG22 281 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 CYP2F1P24903 491 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 CDKN2BP42772 138 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 PGGT1BP53609 377 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 WNT7BP56706 349 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 LGALS3BPQ08380 585 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 CHSY3Q70JA7 882 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 VASH1Q7L8A9 365 aaPredicted RBP12.53□□□□□ -0.4
SYNRG-229ENST00000621136 CATSPER4Q7RTX7 472 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 NAT8LQ8N9F0 302 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 ATL1Q8WXF7 558 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 EBNA1BP2Q99848 306 aaKnown RBP12.53□□□□□ -0.4
SYNRG-229ENST00000621136 NKIRAS2Q9NYR9 191 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
SYNRG-229ENST00000621136 FAM240BA0A1B0GVZ2 78 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 SMIM30A4D0T7 59 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 NRP1O14786 923 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 AIREO43918 545 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 SNX4O95219 450 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 METTL18O95568 372 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 GRIA1P42261 906 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 CACNB2Q08289 660 aaPredicted RBP12.53□□□□□ -0.4
SYNRG-229ENST00000621136 SPP2Q13103 211 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 CTBP1Q13363 440 aa12.53□□□□□ -0.4
SYNRG-229ENST00000621136 MEP1AQ16819 746 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms