RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ZNF217O75362 1048 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 SEMA4FO95754 770 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 AP2A1O95782 977 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 NDST3O95803 873 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 GAS8O95995 478 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 TPH1P17752 444 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 FDFT1P37268 417 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 EPHB1P54762 984 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 SLC14A2Q15849 920 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 LPAL2Q16609 132 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 ZNF528Q3MIS6 628 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 ZNF534Q76KX8 674 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 ARMCX6Q7L4S7 300 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 KBTBD6Q86V97 674 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 SLC41A1Q8IVJ1 513 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 OR52K1Q8NGK4 314 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 MCCC1Q96RQ3 725 aaPredicted RBP13.7□□□□□ -0.22
NEK3-210ENST00000620675 TBL1YQ9BQ87 522 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 FSD1LQ9BXM9 530 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 PHTF1Q9UMS5 762 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 SHOC2Q9UQ13 582 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 NCKAP1Q9Y2A7 1128 aa13.7□□□□□ -0.22
NEK3-210ENST00000620675 TBC1D3DA0A087WVF3 549 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 TBC1D3IA0A087WXS9 549 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 TBC1D3EA0A087X179 549 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 TBC1D3KA0A087X1G2 549 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 TBC1D3FA6NER0 549 aaPredicted RBP13.69□□□□□ -0.22
NEK3-210ENST00000620675 C10orf142B7Z368 130 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 TBC1D3LB9A6J9 549 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 GOLGA8MH3BSY2 632 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 MMP20O60882 483 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 RPP40O75818 363 aaKnown RBP13.69□□□□□ -0.22
NEK3-210ENST00000620675 PCDH8O95206 1070 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 TBC1D3HP0C7X1 549 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 GM2AP17900 193 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 PTGER3P43115 390 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 RPL6Q02878 288 aaKnown RBP13.69□□□□□ -0.22
NEK3-210ENST00000620675 MSLNQ13421 630 aaPredicted RBP13.69□□□□□ -0.22
NEK3-210ENST00000620675 FGL2Q14314 439 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 PRPSAP1Q14558 356 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 KCNJ11Q14654 390 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 CDKN3Q16667 212 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 TBC1D3GQ6DHY5 549 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 TBC1D3CQ6IPX1 549 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 TBC1D3Q8IZP1 549 aaPredicted RBP13.69□□□□□ -0.22
NEK3-210ENST00000620675 HCAR2Q8TDS4 363 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 GAB3Q8WWW8 586 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 SCRN2Q96FV2 425 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 FAM86C1Q9NVL1 165 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 AAR2Q9Y312 384 aaKnown RBP13.69□□□□□ -0.22
NEK3-210ENST00000620675 PPIL1Q9Y3C6 166 aa13.69□□□□□ -0.22
NEK3-210ENST00000620675 CTAGE15A4D2H0 777 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 SLC4A1P02730 911 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 IGHV4-34P06331 123 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 CTAGE8P0CG41 777 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 XPAP23025 273 aaPredicted RBP13.68□□□□□ -0.22
NEK3-210ENST00000620675 ADCY8P40145 1251 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 RPL21P46778 160 aaKnown RBP13.68□□□□□ -0.22
NEK3-210ENST00000620675 TUBB2AQ13885 445 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 CNGA3Q16281 694 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 DENND2CQ68D51 928 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 CRTC1Q6UUV9 634 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 CTAGE6Q86UF2 777 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 CTAGE4Q8IX94 777 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 PWWP2AQ96N64 755 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 TUBB2BQ9BVA1 445 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 FEZ2Q9UHY8 353 aaPredicted RBP13.68□□□□□ -0.22
NEK3-210ENST00000620675 SNX24Q9Y343 169 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 PLXNB3Q9ULL4 1909 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 TMEM131Q92545 1883 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 ZNF106Q9H2Y7 1883 aaKnown RBP13.68□□□□□ -0.22
NEK3-210ENST00000620675 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.68□□□□□ -0.22
NEK3-210ENST00000620675 A0A1W2PQU0 124 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 IGLON5A6NGN9 336 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 E7EVH7 732 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 NEMP1O14524 444 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 BUD23O43709 281 aaKnown RBP13.68□□□□□ -0.22
NEK3-210ENST00000620675 RNGTTO60942 597 aaKnown RBP13.68□□□□□ -0.22
NEK3-210ENST00000620675 AVILO75366 819 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 ZNF189O75820 626 aaPredicted RBP13.68□□□□□ -0.22
NEK3-210ENST00000620675 CLDN7O95471 211 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 MAOBP27338 520 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 LIG3P49916 1009 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 DHX34Q14147 1143 aaKnown RBP13.68□□□□□ -0.22
NEK3-210ENST00000620675 PTPRCAPQ14761 206 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 LRRC66Q68CR7 880 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 DPPA4Q7L190 304 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 LYSMD3Q7Z3D4 306 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 BIRC7Q96CA5 298 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 MYOCQ99972 504 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 DUSP15Q9H1R2 295 aaPredicted RBP13.68□□□□□ -0.22
NEK3-210ENST00000620675 DPH5Q9H2P9 285 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 LRRC40Q9H9A6 602 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 SGK2Q9HBY8 427 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 FZD3Q9NPG1 666 aa13.68□□□□□ -0.22
NEK3-210ENST00000620675 RRAGDQ9NQL2 400 aaPredicted RBP13.68□□□□□ -0.22
NEK3-210ENST00000620675 DMGDHQ9UI17 866 aaKnown RBP13.68□□□□□ -0.22
NEK3-210ENST00000620675 ARIH1Q9Y4X5 557 aaPredicted RBP13.68□□□□□ -0.22
NEK3-210ENST00000620675 DMXL1Q9Y485 3027 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 ESYT3A0FGR9 886 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms