RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 SOX13Q9UN79 622 aa22.16■■□□□ 1.14
SNRNP70-209ENST00000601065 PPIL1Q9Y3C6 166 aa22.16■■□□□ 1.14
SNRNP70-209ENST00000601065 MTF2Q9Y483 593 aaPredicted RBP22.16■■□□□ 1.14
SNRNP70-209ENST00000601065 MAGEB16A2A368 324 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 CTPS1P17812 591 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 PGAM1P18669 254 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 ADRA1DP25100 572 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 POLR2LP62875 67 aaKnown RBP22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 POM121L1PQ3SYA9 428 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 CCNJLQ8IV13 435 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 PPHLN1Q8NEY8 458 aaKnown RBP22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 BRSK1Q8TDC3 778 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 PTCD2Q8WV60 388 aaKnown RBP22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 PLAC1Q9HBJ0 212 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 CD248Q9HCU0 757 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 TCAF1Q9Y4C2 921 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 SPO11Q9Y5K1 396 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 BPTFQ12830 3046 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 HEATR9A2RTY3 570 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 ABHD2P08910 425 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 ALPIP09923 528 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 METAP1P53582 386 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 COPAP53621 1224 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 EIF3BP55884 814 aaKnown RBP22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 ZNF844Q08AG5 666 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 FZD5Q13467 585 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 UBXN2BQ14CS0 331 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 PTPRRQ15256 657 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 UGP2Q16851 508 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 CEP85LQ5SZL2 805 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 ARMC3Q5W041 872 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 Q6ZS52 159 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 SYNPOQ8N3V7 929 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 MDGA1Q8NFP4 955 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 NECAB3Q96P71 396 aaPredicted RBP22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 LMAN1LQ9HAT1 526 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 MAGEE1Q9HCI5 957 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 MMP17Q9ULZ9 603 aa22.15■■□□□ 1.14
SNRNP70-209ENST00000601065 A0A087WUV0 522 aaPredicted RBP22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 FAM237BA0A1B0GVD1 139 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 C16orf96A6NNT2 1141 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 C1QTNF3-AMACRE9PGA6 284 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 COL9A1P20849 921 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 ITGB7P26010 798 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 SATB1Q01826 763 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 SEPT6Q14141 434 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 LRRC32Q14392 662 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 EOGTQ5NDL2 527 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 PKN3Q6P5Z2 889 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 UNC5AQ6ZN44 842 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 TMEM135Q86UB9 458 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 OR2T3Q8NH03 318 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 SCRN2Q96FV2 425 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 PPP1R16AQ96I34 528 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 ZNF778Q96MU6 729 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 NELL2Q99435 816 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 FOXQ1Q9C009 403 aa22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 MRM3Q9HC36 420 aaKnown RBP22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.14■■□□□ 1.13
SNRNP70-209ENST00000601065 CAPN8A6NHC0 703 aa22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 LDB2O43679 373 aa22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 RNASEH1O60930 286 aaKnown RBP22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 TSHRP16473 764 aa22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 PHBP35232 272 aa22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 HNF1BP35680 557 aa22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 ABL2P42684 1182 aa22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 PSMD8P48556 350 aa22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 PARS2Q7L3T8 475 aaKnown RBP22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 GLT6D1Q7Z4J2 308 aa22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 NDUFAF2Q8N183 169 aa22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 ARRDC3Q96B67 414 aa22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 MFSD3Q96ES6 412 aa22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 MCCC1Q96RQ3 725 aaPredicted RBP22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 LYSMD1Q96S90 227 aa22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 MKRN2Q9H000 416 aaKnown RBP22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 FBRSQ9HAH7 460 aa22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 ARL5AQ9Y689 179 aa22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 RPS6KL1Q9Y6S9 549 aa22.13■■□□□ 1.13
SNRNP70-209ENST00000601065 MROH6A6NGR9 719 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 FAM170BA6NMN3 283 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 AURKAO14965 403 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 USP1O94782 785 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 POLBP06746 335 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 TIMP2P16035 220 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 FAM46CQ5VWP2 391 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 STEAP4Q687X5 459 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 CES3Q6UWW8 571 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 USP45Q70EL2 814 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 TBC1D17Q9HA65 648 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 HACD3Q9P035 362 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 CCDC78A2IDD5 438 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 UPK3BL1B0FP48 263 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 UPK3BL2E5RIL1 263 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 CRTAMO95727 393 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 GPS2Q13227 327 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 CRYMQ14894 314 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 TAF1AQ15573 450 aaPredicted RBP22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 CST6Q15828 149 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 LRRC73Q5JTD7 316 aa22.12■■□□□ 1.13
SNRNP70-209ENST00000601065 TMEM92Q6UXU6 159 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms