RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 TSPAN3O60637 253 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 CLDN11O75508 207 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 ZMPSTE24O75844 475 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 CD1EP15812 388 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 SCNN1BP51168 640 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 OXCT1P55809 520 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 SESN3P58005 492 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 FRMD7Q6ZUT3 714 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 LMNTD2Q8IXW0 634 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 DTX3LQ8TDB6 740 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 PLD4Q96BZ4 506 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 PANX3Q96QZ0 392 aa21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 CINPQ9BW66 212 aaPredicted RBP21.71■■□□□ 1.07
GRAMD1A-212ENST00000600231 TANC1Q9C0D5 1861 aa21.7■■□□□ 1.07
GRAMD1A-212ENST00000600231 TMEM233B4DJY2 109 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 KDELR3O43731 214 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 NDST3O95803 873 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 GLP2RO95838 553 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 ERFP50548 548 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 APLP1P51693 650 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 HK2P52789 917 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 PLD1Q13393 1074 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 ANKRD33Q7Z3H0 272 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 PIWIL4Q7Z3Z4 852 aaKnown RBP21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 NET1Q7Z628 596 aaPredicted RBP21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 PIM3Q86V86 326 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.7■■□□□ 1.063e-8■■■■■ 116
GRAMD1A-212ENST00000600231 KDM1BQ8NB78 822 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 STMN2Q93045 179 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 MYRFLQ96LU7 910 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 ZNF570Q96NI8 536 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 RNF208Q9H0X6 261 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 AGO1Q9UL18 857 aaKnown RBP21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 OGDHLQ9ULD0 1010 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 CD3EAPO15446 510 aaKnown RBP21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 NPHS1O60500 1241 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 TBX10O75333 385 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 HNRNPLP14866 589 aaKnown RBP eCLIP21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 DNAJB13P59910 316 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 PFKPQ01813 784 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 TLE2Q04725 743 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 SEMA3AQ14563 771 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 TAF12Q16514 161 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 SPOUT1Q5T280 376 aaKnown RBP21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 GPR158Q5T848 1215 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 RIPOR1Q6ZS17 1223 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 C16orf59Q7L2K0 433 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 TMCO2Q7Z6W1 182 aaPredicted RBP21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 SCG3Q8WXD2 468 aaKnown RBP21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 PEX13Q92968 403 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 LENG8Q96PV6 779 aaPredicted RBP21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 RETREG1Q9H6L5 497 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 VTI1BQ9UEU0 232 aa21.7■■□□□ 1.06
GRAMD1A-212ENST00000600231 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 RHOCP08134 193 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 COX4I1P13073 169 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 PLK1P53350 603 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 ZNF177Q13360 481 aaPredicted RBP21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 PDCD2Q16342 344 aaPredicted RBP21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 ADGRF1Q5T601 910 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 KLC3Q6P597 504 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 SLC39A5Q6ZMH5 540 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 G3BP2Q9UN86 482 aaKnown RBP21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 SSX2IPQ9Y2D8 614 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 YIPF1Q9Y548 306 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 ILVBLA1L0T0 632 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 A8MT66 165 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 F8W8V4 182 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 SLCO1B7G3V0H7 640 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 CBX4O00257 560 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 RPP40O75818 363 aaKnown RBP21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 CIB2O75838 187 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 WISP3O95389 354 aaPredicted RBP21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 SERPINB5P36952 375 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 ALDH1A3P47895 512 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 HTRA3P83110 453 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 IKBKEQ14164 716 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 ACAP2Q15057 778 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 CCDC6Q16204 474 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 ZNF549Q6P9A3 640 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 STOML1Q9UBI4 398 aa21.69■■□□□ 1.06
GRAMD1A-212ENST00000600231 SCAMP3O14828 347 aaKnown RBP21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 IPO13O94829 963 aaKnown RBP21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 SLC4A1P02730 911 aa21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 SOD2P04179 222 aa21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 RBP1P09455 135 aa21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 CR2P20023 1033 aa21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 KCNC1P48547 511 aa21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 NSUN2Q08J23 767 aaKnown RBP eCLIP21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 LAMB3Q13751 1172 aa21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 TRMT5Q32P41 509 aaKnown RBP21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 TRIM60Q495X7 471 aa21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 SH2D4BQ5SQS7 431 aa21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 C1orf146Q5VVC0 180 aa21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 TMEM198Q66K66 360 aa21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 RPS27LQ71UM5 84 aaKnown RBP21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 SMPD4Q9NXE4 827 aa21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 SPO11Q9Y5K1 396 aa21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 A0A1B0GVM2 712 aa21.68■■□□□ 1.06
GRAMD1A-212ENST00000600231 TCAF2A6NFQ2 919 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms