RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 HCSTQ9UBK5 93 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 IPO11Q9UI26 975 aaKnown RBP13.71□□□□□ -0.21
GGA3-214ENST00000582717 G3BP2Q9UN86 482 aaKnown RBP13.71□□□□□ -0.21
GGA3-214ENST00000582717 COPG1Q9Y678 874 aaKnown RBP13.71□□□□□ -0.21
GGA3-214ENST00000582717 MTSS1O43312 755 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 SELPP16109 830 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 CCR1P32246 355 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 MSX2P35548 267 aaPredicted RBP13.71□□□□□ -0.21
GGA3-214ENST00000582717 MAGEA8P43361 318 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 GALK1P51570 392 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 RHDQ02161 417 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 CYTH1Q15438 398 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 DLG2Q15700 870 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 KRT80Q6KB66 452 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 ZNF554Q86TJ5 538 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 KCNMB4Q86W47 210 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 RNF148Q8N7C7 305 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 FNDC8Q8TC99 324 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 STYXQ8WUJ0 223 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 RMND5BQ96G75 393 aaPredicted RBP13.71□□□□□ -0.21
GGA3-214ENST00000582717 UHRF1Q96T88 793 aaPredicted RBP13.71□□□□□ -0.21
GGA3-214ENST00000582717 AGAP2Q99490 1192 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 EFHD1Q9BUP0 239 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 FTHL17Q9BXU8 183 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 UNC93B1Q9H1C4 597 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 ZNHIT2Q9UHR6 403 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 ZDHHC2Q9UIJ5 367 aa13.71□□□□□ -0.21
GGA3-214ENST00000582717 NYNRINQ9P2P1 1898 aaKnown RBP13.7□□□□□ -0.22
GGA3-214ENST00000582717 STX16-NPEPL1H3BU86 382 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 DFFAO00273 331 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 BMP10O95393 424 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 JCHAINP01591 159 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 HOXC13P31276 330 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 NPY2RP49146 381 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 NAGLUP54802 743 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 PSME3P61289 254 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 STX5Q13190 355 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 TMED1Q13445 227 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 IL23RQ5VWK5 629 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 TMEM198Q66K66 360 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 PAOXQ6QHF9 649 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 POTEHQ6S545 545 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 DBF4BQ8NFT6 615 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 TET1Q8NFU7 2136 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 USP33Q8TEY7 942 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 TMA16Q96EY4 203 aaKnown RBP13.7□□□□□ -0.22
GGA3-214ENST00000582717 MAELQ96JY0 434 aaKnown RBP13.7□□□□□ -0.22
GGA3-214ENST00000582717 FCRL2Q96LA5 508 aaPredicted RBP13.7□□□□□ -0.22
GGA3-214ENST00000582717 TEKT5Q96M29 485 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 C1QTNF1Q9BXJ1 281 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 COQ10BQ9H8M1 238 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 PLGRKTQ9HBL7 147 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 VPS45Q9NRW7 570 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 NDFIP2Q9NV92 336 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 TUBA8Q9NY65 449 aaPredicted RBP13.7□□□□□ -0.22
GGA3-214ENST00000582717 ADA2Q9NZK5 511 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 TRHDEQ9UKU6 1024 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 C7orf72A4D263 438 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 ZNF701M0R085 212 aaPredicted RBP13.7□□□□□ -0.22
GGA3-214ENST00000582717 TK2O00142 265 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 MOCS2O96007 188 aaPredicted RBP13.7□□□□□ -0.22
GGA3-214ENST00000582717 TCTN1Q2MV58 587 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 ITPRIPL1Q6GPH6 555 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 C14orf80Q86SX3 495 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 BBS5Q8N3I7 341 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 TMEM151AQ8N4L1 468 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 DNAAF3Q8N9W5 541 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 GPR152Q8TDT2 470 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 ATP6V1E2Q96A05 226 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 ZNF419Q96HQ0 510 aaPredicted RBP13.7□□□□□ -0.22
GGA3-214ENST00000582717 FUBP3Q96I24 572 aaKnown RBP eCLIP13.7□□□□□ -0.22
GGA3-214ENST00000582717 SCYL1Q96KG9 808 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 PPP1R36Q96LQ0 422 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 NPAS2Q99743 824 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 APOL2Q9BQE5 337 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 ANKRD60Q9BZ19 345 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 GPR62Q9BZJ7 368 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 RHOJQ9H4E5 214 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 C20orf96Q9NUD7 363 aaPredicted RBP13.7□□□□□ -0.22
GGA3-214ENST00000582717 UBP1Q9NZI7 540 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 SARDHQ9UL12 918 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 SLC39A10Q9ULF5 831 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 SLC8A2Q9UPR5 921 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 SCML2Q9UQR0 700 aa13.7□□□□□ -0.22
GGA3-214ENST00000582717 HEATR9A2RTY3 570 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 KCNU1A8MYU2 1149 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 AP3B1O00203 1094 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 ENPP3O14638 875 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 SYN3O14994 580 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 NPHS1O60500 1241 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 SLC7A1P30825 629 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 POLD2P49005 469 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 SLC12A1Q13621 1099 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 NFE2Q16621 373 aaPredicted RBP13.69□□□□□ -0.22
GGA3-214ENST00000582717 CTXN3Q4LDR2 81 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 FAM171A1Q5VUB5 890 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 OTOP3Q7RTS5 596 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 LSMEM2Q8N112 164 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 ATAD1Q8NBU5 361 aa13.69□□□□□ -0.22
GGA3-214ENST00000582717 C8orf48Q96LL4 319 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms