RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 ZMPSTE24O75844 475 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 VDRP11473 427 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 MAPK9P45984 424 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 CDH4P55283 916 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 ARF5P84085 180 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 LRMPQ12912 555 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 DNASE1L3Q13609 305 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 IL10RAQ13651 578 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 CHRNA6Q15825 494 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 MIIPQ5JXC2 388 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 LCLAT1Q6UWP7 414 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 SLC9A9Q8IVB4 645 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 GRAMD1CQ8IYS0 662 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 PCDH20Q8N6Y1 951 aaKnown RBP14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 FDCSPQ8NFU4 85 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 STAMBPL1Q96FJ0 436 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 ANLNQ9NQW6 1124 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 FBXO8Q9NRD0 319 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 COPG2Q9UBF2 871 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 ZNF451Q9Y4E5 1061 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 ST14Q9Y5Y6 855 aa14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 MN1Q10571 1320 aaPredicted RBP14.12□□□□□ -0.15
CSNK1D-213ENST00000580446 TOR1BO14657 336 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 PAGE1O75459 146 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 KIAA0754O94854 1291 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 FBXO21O94952 628 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 MAP3K6O95382 1288 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 CD160O95971 181 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 STK4Q13043 487 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 NME3Q13232 169 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 CLPPQ16740 277 aaPredicted RBP14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 PAPD7Q5XG87 772 aaKnown RBP14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 FJX1Q86VR8 437 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 ZNF295-AS1Q8N0V1 137 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 IQCKQ8N0W5 287 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 NAGSQ8N159 534 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 PELI3Q8N2H9 469 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 GLIS1Q8NBF1 620 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 KIAA0895Q8NCT3 520 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 KCTD10Q9H3F6 313 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 CARS2Q9HA77 564 aaKnown RBP14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 TMEM8AQ9HCN3 771 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 FRMD4BQ9Y2L6 1034 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 PLEKHM1Q9Y4G2 1056 aa14.11□□□□□ -0.15
CSNK1D-213ENST00000580446 HEATR9A2RTY3 570 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 BHMG1C9JSJ3 638 aaPredicted RBP14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 ZNF185O15231 689 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 CCNB1P14635 433 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 MAN1A1P33908 653 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 PTGIRP43119 386 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 GPR3P46089 330 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 PER3P56645 1201 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 SRSF11Q05519 484 aaKnown RBP14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 EIF4EBP2Q13542 120 aaPredicted RBP14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 CUL2Q13617 745 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 CUL4BQ13620 913 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 ARHGAP22Q7Z5H3 698 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 TTC39CQ8N584 583 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 ATL2Q8NHH9 583 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 NCSTNQ92542 709 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 AHCYL2Q96HN2 611 aaKnown RBP14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 C7orf25Q9BPX7 421 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 CEP44Q9C0F1 390 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 GSX1Q9H4S2 264 aaPredicted RBP14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 AKIRIN1Q9H9L7 192 aaPredicted RBP14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 ATP13A1Q9HD20 1204 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 LATS2Q9NRM7 1088 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 RAB20Q9NX57 234 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 LNPEPQ9UIQ6 1025 aa14.1□□□□□ -0.15
CSNK1D-213ENST00000580446 NBEAL1Q6ZS30 2694 aa14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 I6L893 689 aaPredicted RBP14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 RNF225M0QZC1 329 aaPredicted RBP14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 CACNB4O00305 520 aaPredicted RBP14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 GRAP2O75791 330 aa14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 FUCA1P04066 466 aa14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 PDIA4P13667 645 aaKnown RBP14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 COX6B1P14854 86 aa14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 CCR1P32246 355 aa14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 ACVRL1P37023 503 aa14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 SH3BP2P78314 561 aa14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 MAP7Q14244 749 aa14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 FAM69BQ5VUD6 431 aa14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 FAM199XQ6PEV8 388 aaPredicted RBP14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 ARHGEF26Q96DR7 871 aa14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 MDFIQ99750 246 aa14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 ZPBPQ9BS86 351 aa14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 LRRC27Q9C0I9 530 aa14.09□□□□□ -0.15
CSNK1D-213ENST00000580446 PRSS38A1L453 326 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 TEX33O43247 280 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 KRT13P13646 458 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 ITGA3P26006 1051 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 PTGER4P35408 488 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 GNPDA1P46926 289 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 LIG3P49916 1009 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 MXI1P50539 228 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 KRT39Q6A163 491 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 RETSATQ6NUM9 610 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 TMEM270Q6UE05 265 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 GDPD4Q6W3E5 623 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 LYSMD3Q7Z3D4 306 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms