RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 MRPL40Q9NQ50 206 aaKnown RBP5.76□□□□□ -1.49
CDH13-213ENST00000569454 NDFIP2Q9NV92 336 aa5.76□□□□□ -1.49
CDH13-213ENST00000569454 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.76□□□□□ -1.49
CDH13-213ENST00000569454 IL1RAPL1Q9NZN1 696 aa5.76□□□□□ -1.49
CDH13-213ENST00000569454 TRPM5Q9NZQ8 1165 aa5.76□□□□□ -1.49
CDH13-213ENST00000569454 ARMCX1Q9P291 453 aa5.76□□□□□ -1.49
CDH13-213ENST00000569454 STX18Q9P2W9 335 aaKnown RBP5.76□□□□□ -1.49
CDH13-213ENST00000569454 XPR1Q9UBH6 696 aa5.76□□□□□ -1.49
CDH13-213ENST00000569454 UBA2Q9UBT2 640 aaPredicted RBP5.76□□□□□ -1.49
CDH13-213ENST00000569454 MCM8Q9UJA3 840 aa5.76□□□□□ -1.49
CDH13-213ENST00000569454 TMCO1Q9UM00 188 aa5.76□□□□□ -1.49
CDH13-213ENST00000569454 PRPF19Q9UMS4 504 aaKnown RBP5.76□□□□□ -1.49
CDH13-213ENST00000569454 CDYLQ9Y232 598 aa5.76□□□□□ -1.49
CDH13-213ENST00000569454 COMMD10Q9Y6G5 202 aa5.76□□□□□ -1.49
CDH13-213ENST00000569454 USP34Q70CQ2 3546 aa5.76□□□□□ -1.49
CDH13-213ENST00000569454 PTPN13Q12923 2485 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.75□□□□□ -1.49
CDH13-213ENST00000569454 ZNF840PA6NDX5 716 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 A8MUI8 341 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 J3KR12 359 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ZNF195O14628 629 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 PHGDHO43175 533 aaKnown RBP5.75□□□□□ -1.49
CDH13-213ENST00000569454 KDELR3O43731 214 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ITM2AO43736 263 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 AOC2O75106 756 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 SMIM24O75264 130 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 LYPLA1O75608 230 aaPredicted RBP5.75□□□□□ -1.49
CDH13-213ENST00000569454 CNTN5O94779 1100 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 IPO13O94829 963 aaKnown RBP5.75□□□□□ -1.49
CDH13-213ENST00000569454 PIGNO95427 931 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 PSMG1O95456 288 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 GLP2RO95838 553 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 EFEMP2O95967 443 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 SOD2P04179 222 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 RHOCP08134 193 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 MMP2P08253 660 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ATXN1LP0C7T5 689 aaKnown RBP5.75□□□□□ -1.49
CDH13-213ENST00000569454 ACADSP16219 412 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 PFKLP17858 780 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 LAG3P18627 525 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ATF6P18850 670 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 GNAZP19086 355 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 CD9P21926 228 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 GLDCP23378 1020 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 PSMA3P25788 255 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 HOXD9P28356 352 aaPredicted RBP5.75□□□□□ -1.49
CDH13-213ENST00000569454 GABRB3P28472 473 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 PPM1AP35813 382 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ALDH1A3P47895 512 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 GPR15P49685 360 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 PGFP49763 221 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 SUOXP51687 545 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 NAGLUP54802 743 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ARPP19P56211 112 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ACTR3P61158 418 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ATP6V0D1P61421 351 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 MPP1Q00013 466 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 IRF9Q00978 393 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 PFKPQ01813 784 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 DSC2Q02487 901 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 KDSRQ06136 332 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 BTKQ06187 659 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 SLC34A1Q06495 639 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ZNF177Q13360 481 aaPredicted RBP5.75□□□□□ -1.49
CDH13-213ENST00000569454 CTBP1Q13363 440 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 DLG2Q15700 870 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 TAF12Q16514 161 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 TYSND1Q2T9J0 566 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 HSF5Q4G112 596 aaPredicted RBP5.75□□□□□ -1.49
CDH13-213ENST00000569454 PABPC1LQ4VXU2 614 aaKnown RBP5.75□□□□□ -1.49
CDH13-213ENST00000569454 SIRPB2Q5JXA9 342 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ADGRF1Q5T601 910 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 C1orf53Q5VUE5 145 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 SDHAF4Q5VUM1 108 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 CNKSR3Q6P9H4 555 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 AFTPHQ6ULP2 937 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 C16orf89Q6UX73 402 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 RNF19BQ6ZMZ0 732 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ERMP1Q7Z2K6 904 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 EFL1Q7Z2Z2 1120 aaKnown RBP5.75□□□□□ -1.49
CDH13-213ENST00000569454 TMC7Q7Z402 723 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 RAB44Q7Z6P3 723 aaPredicted RBP5.75□□□□□ -1.49
CDH13-213ENST00000569454 ADGRG6Q86SQ4 1221 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ITIH5Q86UX2 942 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 TREML1Q86YW5 311 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 SLC41A1Q8IVJ1 513 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 HERC6Q8IVU3 1022 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 APLFQ8IW19 511 aaPredicted RBP5.75□□□□□ -1.49
CDH13-213ENST00000569454 DENND6AQ8IWF6 608 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ULK2Q8IYT8 1036 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 LGI2Q8N0V4 545 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 PLD6Q8N2A8 252 aaKnown RBP5.75□□□□□ -1.49
CDH13-213ENST00000569454 SDR16C5Q8N3Y7 309 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 CHCHD4Q8N4Q1 142 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 CPSF7Q8N684 471 aaKnown RBP5.75□□□□□ -1.49
CDH13-213ENST00000569454 TTC9BQ8N6N2 239 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ZNF781Q8N8C0 355 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 ZNF454Q8N9F8 522 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 OR13J1Q8NGT2 312 aa5.75□□□□□ -1.49
CDH13-213ENST00000569454 OR6P1Q8NGX9 317 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms