RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 HPCAL4Q9UM19 191 aa14.95□□□□□ -0.02
USB1-214ENST00000568848 USP9YO00507 2555 aaPredicted RBP14.95□□□□□ -0.02
USB1-214ENST00000568848 A0A0U1RQS6 177 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 GTPBP10A4D1E9 387 aaKnown RBP14.94□□□□□ -0.02
USB1-214ENST00000568848 C2CD4BA6NLJ0 364 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 RIOK3O14730 519 aaKnown RBP14.94□□□□□ -0.02
USB1-214ENST00000568848 CREB3O43889 395 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 GFPT2O94808 682 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 TNFP01375 233 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 FUCA1P04066 466 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 ITGB2P05107 769 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 PRKCSHP14314 528 aaPredicted RBP14.94□□□□□ -0.02
USB1-214ENST00000568848 LIFP15018 202 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 AK4P27144 223 aaPredicted RBP14.94□□□□□ -0.02
USB1-214ENST00000568848 SDC4P31431 198 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 MMP12P39900 470 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 BLKP51451 505 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 HLTFQ14527 1009 aaKnown RBP eCLIP14.94□□□□□ -0.02
USB1-214ENST00000568848 UGP2Q16851 508 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 C14orf28Q4W4Y0 310 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 KLHDC7AQ5VTJ3 777 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 ZNF761Q86XN6 746 aaPredicted RBP14.94□□□□□ -0.02
USB1-214ENST00000568848 ARHGEF26Q96DR7 871 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 CCDC74BQ96LY2 380 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 PCDHB18PQ96TA0 734 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 NAA15Q9BXJ9 866 aaKnown RBP14.94□□□□□ -0.02
USB1-214ENST00000568848 SLC12A9Q9BXP2 914 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 ZNF71Q9NQZ8 489 aaPredicted RBP14.94□□□□□ -0.02
USB1-214ENST00000568848 NOCTQ9UK39 431 aaKnown RBP14.94□□□□□ -0.02
USB1-214ENST00000568848 PLEKHM1Q9Y4G2 1056 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 ST14Q9Y5Y6 855 aa14.94□□□□□ -0.02
USB1-214ENST00000568848 PES1O00541 588 aaKnown RBP14.93□□□□□ -0.02
USB1-214ENST00000568848 TEX33O43247 280 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 DUX1O43812 170 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 RECQL5O94762 991 aaPredicted RBP14.93□□□□□ -0.02
USB1-214ENST00000568848 FGFR1OPO95684 399 aaKnown RBP14.93□□□□□ -0.02
USB1-214ENST00000568848 FGF3P11487 239 aaPredicted RBP14.93□□□□□ -0.02
USB1-214ENST00000568848 GLB1P16278 677 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 HTR1BP28222 390 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 EPHB2P29323 1055 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 ALDH4A1P30038 563 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 RFC1P35251 1148 aaPredicted RBP14.93□□□□□ -0.02
USB1-214ENST00000568848 PEX5P50542 639 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 FMO1Q01740 532 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 ARHGEF7Q14155 803 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 MAN2A1Q16706 1144 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 VWA3BQ502W6 1294 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 SCYL2Q6P3W7 929 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 OGFOD3Q6PK18 319 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 LVRNQ6Q4G3 990 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 ARHGAP36Q6ZRI8 547 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 ZSCAN30Q86W11 494 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 NRROSQ86YC3 692 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 ELOA2Q8IYF1 753 aaPredicted RBP14.93□□□□□ -0.02
USB1-214ENST00000568848 RTL3Q8N8U3 475 aaKnown RBP14.93□□□□□ -0.02
USB1-214ENST00000568848 OR56A4Q8NGH8 313 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 NDST4Q9H3R1 872 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 SUV39H2Q9H5I1 410 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 SEPT10Q9P0V9 454 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 DKK3Q9UBP4 350 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 ATP8A1Q9Y2Q0 1164 aa14.93□□□□□ -0.02
USB1-214ENST00000568848 TSPAN11A1L157 253 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 F8VZ95 297 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 EPHB6O15197 1021 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 CCP110O43303 1012 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 PPFIA2O75334 1257 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 CSF2RBP32927 897 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 POLD2P49005 469 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 GEMIN4P57678 1058 aaKnown RBP14.92□□□□□ -0.02
USB1-214ENST00000568848 NRG1Q02297 640 aaPredicted RBP14.92□□□□□ -0.02
USB1-214ENST00000568848 PTP4A2Q12974 167 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 EFHC2Q5JST6 749 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 ATP1A1-AS1Q5TC04 95 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 DENND2CQ68D51 928 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 TP53INP2Q8IXH6 220 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 UNC5BQ8IZJ1 945 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 FNIP1Q8TF40 1166 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 NKD1Q969G9 470 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 SLC25A18Q9H1K4 315 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 PDFQ9HBH1 243 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 APPL1Q9UKG1 709 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 B3GALT1Q9Y5Z6 326 aa14.92□□□□□ -0.02
USB1-214ENST00000568848 NOTCH2Q04721 2471 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 TRBV23OR9-2A0A075B6M9 112 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 IGHV5-10-1A0A0J9YXX1 117 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 TMX2-CTNND1H3BSU7 103 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 NKX2-8O15522 239 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 PRKAR1AP10644 381 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 UCHL3P15374 230 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 MMP8P22894 467 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 POLE2P56282 527 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 RAD51Q06609 339 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 MTM1Q13496 603 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 SERINC3Q13530 473 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 TSEN2Q8NCE0 465 aaKnown RBP14.91□□□□□ -0.02
USB1-214ENST00000568848 ART4Q93070 314 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 SMIM14Q96QK8 99 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 CMKLR1Q99788 373 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 CTRCQ99895 268 aa14.91□□□□□ -0.02
USB1-214ENST00000568848 CARS2Q9HA77 564 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms